STRINGSTRING
Tint_2251 Tint_2251 Tint_1652 Tint_1652 Tint_2863 Tint_2863 Tint_1121 Tint_1121
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_2251Lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: cti:RALTA_A1153 outer membrane lipoproteins ABC transporter, membrane component; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214. (422 aa)
Tint_1652PFAM: protein of unknown function DUF214; KEGG: dac:Daci_2015 hypothetical protein. (842 aa)
Tint_2863PFAM: protein of unknown function DUF214; KEGG: psa:PST_2520 lipoprotein release ABC transporter permease. (400 aa)
Tint_1121PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3850 hypothetical protein. (404 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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