STRINGSTRING
katG katG Tint_0302 Tint_0302 Tint_0843 Tint_0843 hisC hisC Tint_1002 Tint_1002 Tint_1003 Tint_1003 dadA dadA Tint_1849 Tint_1849 hisC-2 hisC-2 Tint_2455 Tint_2455 Tint_2884 Tint_2884 Tint_2938 Tint_2938 Tint_2994 Tint_2994 Tint_2997 Tint_2997 Tint_3000 Tint_3000 Tint_3001 Tint_3001 Tint_3002 Tint_3002 Tint_3003 Tint_3003 Tint_3004 Tint_3004 Tint_3005 Tint_3005 Tint_3006 Tint_3006 Tint_3007 Tint_3007 Tint_3008 Tint_3008
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (731 aa)
Tint_0302PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bvi:Bcep1808_0521 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
Tint_0843PFAM: AMP-dependent synthetase and ligase; KEGG: bpt:Bpet4737 putative phenylacetate-CoA ligase. (437 aa)
hisCKEGG: azo:azo3348 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (361 aa)
Tint_1002TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: bbr:BB4213 putative hemolysin; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (371 aa)
Tint_1003TIGRFAM: phenylalanine-4-hydroxylase; KEGG: mpt:Mpe_A0347 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase-like. (288 aa)
dadAFAD dependent oxidoreductase; Oxidative deamination of D-amino acids. (430 aa)
Tint_1849PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A2293 aromatic amino acid aminotransferase. (401 aa)
hisC-2KEGG: rpf:Rpic12D_0846 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (376 aa)
Tint_2455PFAM: FAD dependent oxidoreductase; KEGG: bja:bll4301 putative oxidoreductase protein. (347 aa)
Tint_2884PFAM: aminotransferase class IV; KEGG: bxe:Bxe_A4217 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. (291 aa)
Tint_2938PFAM: Amidase; KEGG: acr:Acry_2933 amidase; Belongs to the amidase family. (501 aa)
Tint_2994PFAM: monooxygenase FAD-binding; KEGG: eba:ebA3297 FAD-dependent oxidoreductase. (558 aa)
Tint_2997KEGG: vap:Vapar_1226 phenylacetic acid degradation protein PaaN; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase. (684 aa)
Tint_3000phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: mpt:Mpe_A0991 putative ring-hydroxylation complex protein 4; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin. (360 aa)
Tint_3001KEGG: dac:Daci_0813 phenylacetate-CoA oxygenase, PaaJ subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59. (171 aa)
Tint_3002KEGG: vap:Vapar_1233 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein. (257 aa)
Tint_3003KEGG: vap:Vapar_1234 phenylacetate-CoA oxygenase, PaaH subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B. (105 aa)
Tint_3004KEGG: lch:Lcho_3574 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein. (335 aa)
Tint_3005phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (440 aa)
Tint_3006KEGG: lch:Lcho_2404 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein. (161 aa)
Tint_3007PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: azo:azo0301 3-hydroxy-acyl-CoA dehydrogenase. (490 aa)
Tint_3008PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpt:Mpe_A0984 short chain enoyl-CoA hydratase / enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (265 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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