STRINGSTRING
WPG_2596 WPG_2596 WPG_1593 WPG_1593 purD purD sucC sucC purK purK WPG_0823 WPG_0823 WPG_0060 WPG_0060 ddl ddl WPG_3229 WPG_3229 gshB gshB WPG_2842 WPG_2842 WPG_2834 WPG_2834
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WPG_2596Carbamoyl-phosphate synthase large chain. (951 aa)
WPG_1593Ribosomal protein S6 glutaminyl transferase; Belongs to the RimK family. (291 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (423 aa)
sucCsuccinyl-CoA ligase [ADP-forming] beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (396 aa)
purKPhosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (384 aa)
WPG_0823ATP-grasp enzyme-like protein. (316 aa)
WPG_0060ATP-grasp enzyme-like protein. (342 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (317 aa)
WPG_3229ATP-grasp enzyme-like protein. (323 aa)
gshBSimilar to Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. (345 aa)
WPG_2842Hypothetical protein. (300 aa)
WPG_2834Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (942 aa)
Your Current Organism:
Winogradskyella sp. PG2
NCBI taxonomy Id: 754409
Other names: W. sp. PG-2, Winogradskyella sp. PG-2
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