STRINGSTRING
Q7C_1955 Q7C_1955 Q7C_2038 Q7C_2038 Q7C_2290 Q7C_2290 Q7C_2291 Q7C_2291 Q7C_2562 Q7C_2562 Q7C_2583 Q7C_2583 Q7C_2638 Q7C_2638 Q7C_496 Q7C_496 Q7C_568 Q7C_568 Q7C_701 Q7C_701 Q7C_756 Q7C_756 Q7C_703 Q7C_703 Q7C_1397 Q7C_1397 Q7C_15 Q7C_15 Q7C_1839 Q7C_1839
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q7C_1955Putative permease PerM (YfgO); PFAM: Domain of unknown function DUF20. (366 aa)
Q7C_2038PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (467 aa)
Q7C_2290PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family. (449 aa)
Q7C_2291PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (414 aa)
Q7C_2562Heavy metal RND efflux outer membrane protein, CzcC family; PFAM: Outer membrane efflux protein. (428 aa)
Q7C_2583PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family. (466 aa)
Q7C_2638Putative permease often clustered with de novo purine synthesis; PFAM: Domain of unknown function DUF20. (356 aa)
Q7C_496PFAM: Outer membrane efflux protein. (634 aa)
Q7C_568RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein. (455 aa)
Q7C_701PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (439 aa)
Q7C_756PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (474 aa)
Q7C_703TIGRFAM: type I secretion membrane fusion protein, HlyD family. (346 aa)
Q7C_1397PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (438 aa)
Q7C_15PFAM: Outer membrane efflux protein. (392 aa)
Q7C_1839RND efflux system, outer membrane lipoprotein CmeC; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (469 aa)
Your Current Organism:
Methylophaga frappieri
NCBI taxonomy Id: 754477
Other names: ATCC BAA-2434, DSM 25690, M. frappieri, Methylophaga frappieri Villeneuve et al. 2013, Methylophaga sp. JAM7, strain JAM7
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