STRINGSTRING
Q7C_367 Q7C_367 Q7C_52 Q7C_52 bamD bamD Q7C_422 Q7C_422 Q7C_396 Q7C_396 Q7C_323 Q7C_323 Q7C_282 Q7C_282 Q7C_2627 Q7C_2627 Q7C_259 Q7C_259 Q7C_2562 Q7C_2562 Q7C_2532 Q7C_2532 lptD lptD Q7C_2486 Q7C_2486 Q7C_2476 Q7C_2476 Q7C_2429 Q7C_2429 flgH flgH Q7C_2291 Q7C_2291 Q7C_2104 Q7C_2104 lolB lolB Q7C_2084 Q7C_2084 Q7C_2049 Q7C_2049 Q7C_2038 Q7C_2038 Q7C_2037 Q7C_2037 Q7C_1988 Q7C_1988 Q7C_198 Q7C_198 Q7C_1898 Q7C_1898 Q7C_1897 Q7C_1897 Q7C_188 Q7C_188 Q7C_1870 Q7C_1870 Q7C_1862 Q7C_1862 Q7C_1843 Q7C_1843 Q7C_184 Q7C_184 Q7C_1839 Q7C_1839 Q7C_1833 Q7C_1833 Q7C_1809 Q7C_1809 Q7C_1785 Q7C_1785 Q7C_1751 Q7C_1751 Q7C_1745 Q7C_1745 Q7C_1674 Q7C_1674 mltF mltF Q7C_1600 Q7C_1600 Q7C_15 Q7C_15 Q7C_1397 Q7C_1397 Q7C_1395 Q7C_1395 Q7C_1376 Q7C_1376 Q7C_1355 Q7C_1355 Q7C_123 Q7C_123 Q7C_1173 Q7C_1173 rlpA rlpA Q7C_568 Q7C_568 Q7C_1166 Q7C_1166 Q7C_1165 Q7C_1165 Q7C_112 Q7C_112 Q7C_1064 Q7C_1064 bamE bamE Q7C_1 Q7C_1 lptE lptE Q7C_662 Q7C_662 Q7C_692 Q7C_692 Q7C_701 Q7C_701 bamB bamB bamA bamA Q7C_756 Q7C_756 Q7C_770 Q7C_770 Q7C_880 Q7C_880 Q7C_968 Q7C_968 Q7C_971 Q7C_971 Q7C_978 Q7C_978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q7C_367PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor. (839 aa)
Q7C_52Outer membrane protein; PFAM: Surface antigen. (576 aa)
bamDPutative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (260 aa)
Q7C_422PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (638 aa)
Q7C_396PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (708 aa)
Q7C_323Nucleoside-binding outer membrane protein; PFAM: Nucleoside-specific channel-forming protein, Tsx. (249 aa)
Q7C_282PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (768 aa)
Q7C_2627PFAM: NlpB/DapX lipoprotein. (354 aa)
Q7C_259General secretion pathway protein D; PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family. (777 aa)
Q7C_2562Heavy metal RND efflux outer membrane protein, CzcC family; PFAM: Outer membrane efflux protein. (428 aa)
Q7C_2532Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX). (428 aa)
lptDOuter membrane protein Imp; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (754 aa)
Q7C_2486Outer membrane receptor protein, mostly Fe transport; PFAM: TonB-dependent Receptor Plug Domain. (696 aa)
Q7C_2476TonB-dependent receptor, putative; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor. (646 aa)
Q7C_2429PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family. (188 aa)
flgHFlagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (236 aa)
Q7C_2291PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (414 aa)
Q7C_2104Phospholipase A1 precursor, Outer membrane phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (357 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (199 aa)
Q7C_2084PFAM: Copper resistance protein B precursor (CopB). (236 aa)
Q7C_2049Lipoprotein Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (180 aa)
Q7C_2038PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (467 aa)
Q7C_2037Outer membrane protein A precursor; PFAM: OmpA family. (182 aa)
Q7C_1988PFAM: OmpW family. (224 aa)
Q7C_198Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (173 aa)
Q7C_1898PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (686 aa)
Q7C_1897PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. (712 aa)
Q7C_188PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain. (822 aa)
Q7C_1870Putative OMR family iron-siderophore receptor precursor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (724 aa)
Q7C_1862PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (744 aa)
Q7C_1843Porin, Gram-negative type. (356 aa)
Q7C_184PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (680 aa)
Q7C_1839RND efflux system, outer membrane lipoprotein CmeC; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (469 aa)
Q7C_1833PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (713 aa)
Q7C_1809PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (742 aa)
Q7C_1785Type IV pilus biogenesis protein PilQ; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. (705 aa)
Q7C_1751PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (678 aa)
Q7C_1745Phosphate-specific outer membrane porin OprP, Pyrophosphate-specific outer membrane porin OprO; PFAM: Phosphate-selective porin O and P. (460 aa)
Q7C_1674Hypothetical protein. (396 aa)
mltFTransglycosylase, Slt family; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (471 aa)
Q7C_1600PFAM: Outer membrane lipoprotein Slp family. (171 aa)
Q7C_15PFAM: Outer membrane efflux protein. (392 aa)
Q7C_1397PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (438 aa)
Q7C_1395PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (707 aa)
Q7C_1376Lipoprotein NlpD; PFAM: Peptidase family M23; LysM domain. (281 aa)
Q7C_1355TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (665 aa)
Q7C_123Putative low-complexity protein. (99 aa)
Q7C_1173TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase. (326 aa)
rlpARare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (282 aa)
Q7C_568RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein. (455 aa)
Q7C_1166TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (726 aa)
Q7C_1165PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (679 aa)
Q7C_112Hypothetical protein. (248 aa)
Q7C_1064Hypothetical protein. (413 aa)
bamEOuter membrane lipoprotein SmpA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (193 aa)
Q7C_1PFAM: Pterin 4 alpha carbinolamine dehydratase. (129 aa)
lptELPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B); Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (167 aa)
Q7C_662Putative lipoprotein; PFAM: Protein of unknown function (DUF330). (190 aa)
Q7C_692PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (741 aa)
Q7C_701PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family. (439 aa)
bamBOuter membrane protein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (388 aa)
bamAOuter membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (758 aa)
Q7C_756PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (474 aa)
Q7C_770PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. (688 aa)
Q7C_880PFAM: LppC putative lipoprotein. (612 aa)
Q7C_968PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG. (334 aa)
Q7C_971PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (688 aa)
Q7C_978PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. (702 aa)
Your Current Organism:
Methylophaga frappieri
NCBI taxonomy Id: 754477
Other names: ATCC BAA-2434, DSM 25690, M. frappieri, Methylophaga frappieri Villeneuve et al. 2013, Methylophaga sp. JAM7, strain JAM7
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