STRINGSTRING
Q7C_66 Q7C_66 Q7C_1023 Q7C_1023 Q7C_1227 Q7C_1227 Q7C_1265 Q7C_1265 cheB cheB Q7C_1357 Q7C_1357 Q7C_1391 Q7C_1391 Q7C_1407 Q7C_1407 Q7C_1409 Q7C_1409 Q7C_1445 Q7C_1445 Q7C_1446 Q7C_1446 Q7C_1508 Q7C_1508 Q7C_67 Q7C_67 Q7C_1563 Q7C_1563 Q7C_1623 Q7C_1623 Q7C_1624 Q7C_1624 Q7C_1686 Q7C_1686 Q7C_1764 Q7C_1764 Q7C_1765 Q7C_1765 Q7C_1768 Q7C_1768 Q7C_1817 Q7C_1817 Q7C_1872 Q7C_1872 Q7C_1873 Q7C_1873 Q7C_1944 Q7C_1944 Q7C_2004 Q7C_2004 Q7C_2063 Q7C_2063 Q7C_2069 Q7C_2069 Q7C_2070 Q7C_2070 Q7C_2126 Q7C_2126 Q7C_2345 Q7C_2345 Q7C_2353 Q7C_2353 Q7C_2557 Q7C_2557 Q7C_256 Q7C_256 Q7C_2645 Q7C_2645 Q7C_306 Q7C_306 Q7C_330 Q7C_330 Q7C_36 Q7C_36 Q7C_424 Q7C_424 Q7C_433 Q7C_433 ntrC ntrC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q7C_66PFAM: Response regulator receiver domain. (130 aa)
Q7C_1023Chemotaxis protein CheV; PFAM: CheW-like domain; Response regulator receiver domain. (313 aa)
Q7C_1227Copper-sensing two-component system response regulator CpxR; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa)
Q7C_1265Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY; PFAM: Response regulator receiver domain. (125 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (341 aa)
Q7C_1357Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (234 aa)
Q7C_1391PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (211 aa)
Q7C_1407Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (212 aa)
Q7C_1409Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (214 aa)
Q7C_1445PFAM: HD domain; Response regulator receiver domain. (372 aa)
Q7C_1446PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain. (854 aa)
Q7C_1508Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box. (894 aa)
Q7C_67Excisionase/Xis, DNA-binding protein; PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family. (203 aa)
Q7C_1563PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (242 aa)
Q7C_1623Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; Bacterial signalling protein N terminal repeat; TIGRFAM: PAS domain S-box. (1118 aa)
Q7C_1624Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain protein; PFAM: HD domain; Response regulator receiver domain. (330 aa)
Q7C_1686Pas; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (434 aa)
Q7C_1764Twitching motility protein PilG; PFAM: Response regulator receiver domain. (136 aa)
Q7C_1765Twitching motility protein PilH; PFAM: Response regulator receiver domain. (121 aa)
Q7C_1768Signal transduction histidine kinase CheA; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain. (1899 aa)
Q7C_1817PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB. (229 aa)
Q7C_1872PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (316 aa)
Q7C_1873Two-component hybrid sensor and regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain. (1135 aa)
Q7C_1944Nitrogen assimilation regulatory protein NtrX; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (424 aa)
Q7C_2004Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY; PFAM: Response regulator receiver domain. (265 aa)
Q7C_2063PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (200 aa)
Q7C_2069PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (985 aa)
Q7C_2070Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (721 aa)
Q7C_2126PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (218 aa)
Q7C_2345Flagellar regulatory protein FleQ; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (453 aa)
Q7C_2353Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY; PFAM: Response regulator receiver domain. (121 aa)
Q7C_2557PFAM: GAF domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (1307 aa)
Q7C_256PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (218 aa)
Q7C_2645Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (211 aa)
Q7C_306PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (223 aa)
Q7C_330PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa)
Q7C_36PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (225 aa)
Q7C_424Copper-sensing two-component system response regulator CpxR; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (227 aa)
Q7C_433Type IV fimbriae expression regulatory protein PilR; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (461 aa)
ntrCNitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (467 aa)
Your Current Organism:
Methylophaga frappieri
NCBI taxonomy Id: 754477
Other names: ATCC BAA-2434, DSM 25690, M. frappieri, Methylophaga frappieri Villeneuve et al. 2013, Methylophaga sp. JAM7, strain JAM7
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