(6 nodes) Molybdopterin dehydrogenase, FAD-binding network (Paraburkholderia sprentiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APA84137.1	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
	APA86063.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	APA85691.1	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
	APA88852.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	APA87505.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	APA88649.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)

Your Current Organism:

Paraburkholderia sprentiae

NCBI taxonomy Id: 754502
Other names: Burkholderia sp. WSM5005, Burkholderia sprentiae WSM5005, P. sprentiae WSM5005, Paraburkholderia sprentiae WSM5005

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APA84137.1	APA85691.1	BJG93_01035	BJG93_10020	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APA84137.1	APA87505.1	BJG93_01035	BJG93_18630	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA84137.1	APA88852.1	BJG93_01035	BJG93_26560	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA85691.1	APA84137.1	BJG93_10020	BJG93_01035	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APA85691.1	APA87505.1	BJG93_10020	BJG93_18630	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA85691.1	APA88852.1	BJG93_10020	BJG93_26560	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA87505.1	APA84137.1	BJG93_18630	BJG93_01035	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA87505.1	APA85691.1	BJG93_18630	BJG93_10020	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA87505.1	APA88852.1	BJG93_18630	BJG93_26560	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
APA88852.1	APA84137.1	BJG93_26560	BJG93_01035	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA88852.1	APA85691.1	BJG93_26560	BJG93_10020	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APA88852.1	APA87505.1	BJG93_26560	BJG93_18630	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903