(5 nodes) MCM domain network (Arthrobotrys oligospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOL_s00006g301	DNA helicase; Belongs to the MCM family. (963 aa)
	AOL_s00007g395	DNA helicase; Belongs to the MCM family. (722 aa)
	MCM7	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (781 aa)
	AOL_s00080g270	DNA helicase; Belongs to the MCM family. (941 aa)
	AOL_s00109g45	DNA helicase; Belongs to the MCM family. (877 aa)

Your Current Organism:

Arthrobotrys oligospora

NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOL_s00006g301	AOL_s00007g395	G1X0A0	G1X286	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00006g301	AOL_s00080g270	G1X0A0	G1XEN5	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00006g301	AOL_s00109g45	G1X0A0	G1XK16	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00006g301	MCM7	G1X0A0	G1X7C5	DNA helicase; Belongs to the MCM family.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.999
AOL_s00007g395	AOL_s00006g301	G1X286	G1X0A0	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00007g395	AOL_s00080g270	G1X286	G1XEN5	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00007g395	AOL_s00109g45	G1X286	G1XK16	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00007g395	MCM7	G1X286	G1X7C5	DNA helicase; Belongs to the MCM family.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.999
AOL_s00080g270	AOL_s00006g301	G1XEN5	G1X0A0	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00080g270	AOL_s00007g395	G1XEN5	G1X286	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00080g270	AOL_s00109g45	G1XEN5	G1XK16	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00080g270	MCM7	G1XEN5	G1X7C5	DNA helicase; Belongs to the MCM family.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.999
AOL_s00109g45	AOL_s00006g301	G1XK16	G1X0A0	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00109g45	AOL_s00007g395	G1XK16	G1X286	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00109g45	AOL_s00080g270	G1XK16	G1XEN5	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
AOL_s00109g45	MCM7	G1XK16	G1X7C5	DNA helicase; Belongs to the MCM family.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.999
MCM7	AOL_s00006g301	G1X7C5	G1X0A0	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	DNA helicase; Belongs to the MCM family.	0.999
MCM7	AOL_s00007g395	G1X7C5	G1X286	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	DNA helicase; Belongs to the MCM family.	0.999
MCM7	AOL_s00080g270	G1X7C5	G1XEN5	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	DNA helicase; Belongs to the MCM family.	0.999
MCM7	AOL_s00109g45	G1X7C5	G1XK16	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	DNA helicase; Belongs to the MCM family.	0.999