(14 nodes) Cohesin complex, and Condensin complex network (Arthrobotrys oligospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOL_s00006g428	Sister chromatid cohesion protein. (2131 aa)
	AOL_s00007g423	Cnd3 domain-containing protein. (1023 aa)
	AOL_s00043g355	BTB domain-containing protein. (299 aa)
	AOL_s00043g411	Uncharacterized protein. (1559 aa)
	AOL_s00043g611	Structural maintenance of chromosomes protein. (1205 aa)
	AOL_s00054g367	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1170 aa)
	AOL_s00054g594	Structural maintenance of chromosomes protein. (1434 aa)
	AOL_s00054g866	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (837 aa)
	AOL_s00079g12	Structural maintenance of chromosomes protein. (1182 aa)
	AOL_s00080g370	Uncharacterized protein. (655 aa)
	AOL_s00083g185	Structural maintenance of chromosomes protein. (1259 aa)
	AOL_s00083g401	SCD domain-containing protein. (1149 aa)
	AOL_s00112g104	Uncharacterized protein. (727 aa)
	AOL_s00169g242	Uncharacterized protein. (197 aa)

Your Current Organism:

Arthrobotrys oligospora

NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOL_s00006g428	AOL_s00043g355	G1X0M7	G1X3T1	Sister chromatid cohesion protein.	BTB domain-containing protein.	0.973
AOL_s00006g428	AOL_s00043g411	G1X0M7	G1X3Y7	Sister chromatid cohesion protein.	Uncharacterized protein.	0.971
AOL_s00006g428	AOL_s00043g611	G1X0M7	G1X4I7	Sister chromatid cohesion protein.	Structural maintenance of chromosomes protein.	0.997
AOL_s00006g428	AOL_s00054g594	G1X0M7	G1X6V0	Sister chromatid cohesion protein.	Structural maintenance of chromosomes protein.	0.928
AOL_s00006g428	AOL_s00079g12	G1X0M7	G1XCH7	Sister chromatid cohesion protein.	Structural maintenance of chromosomes protein.	0.888
AOL_s00006g428	AOL_s00080g370	G1X0M7	G1XEY5	Sister chromatid cohesion protein.	Uncharacterized protein.	0.997
AOL_s00006g428	AOL_s00083g185	G1X0M7	G1XGQ4	Sister chromatid cohesion protein.	Structural maintenance of chromosomes protein.	0.993
AOL_s00006g428	AOL_s00083g401	G1X0M7	G1XHC0	Sister chromatid cohesion protein.	SCD domain-containing protein.	0.993
AOL_s00006g428	AOL_s00112g104	G1X0M7	G1XLS4	Sister chromatid cohesion protein.	Uncharacterized protein.	0.972
AOL_s00006g428	AOL_s00169g242	G1X0M7	G1XN39	Sister chromatid cohesion protein.	Uncharacterized protein.	0.912
AOL_s00007g423	AOL_s00043g355	G1X2B4	G1X3T1	Cnd3 domain-containing protein.	BTB domain-containing protein.	0.915
AOL_s00007g423	AOL_s00043g411	G1X2B4	G1X3Y7	Cnd3 domain-containing protein.	Uncharacterized protein.	0.461
AOL_s00007g423	AOL_s00043g611	G1X2B4	G1X4I7	Cnd3 domain-containing protein.	Structural maintenance of chromosomes protein.	0.929
AOL_s00007g423	AOL_s00054g367	G1X2B4	G1X673	Cnd3 domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.997
AOL_s00007g423	AOL_s00054g594	G1X2B4	G1X6V0	Cnd3 domain-containing protein.	Structural maintenance of chromosomes protein.	0.999
AOL_s00007g423	AOL_s00054g866	G1X2B4	G1X7Y0	Cnd3 domain-containing protein.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.999
AOL_s00007g423	AOL_s00079g12	G1X2B4	G1XCH7	Cnd3 domain-containing protein.	Structural maintenance of chromosomes protein.	0.999
AOL_s00007g423	AOL_s00080g370	G1X2B4	G1XEY5	Cnd3 domain-containing protein.	Uncharacterized protein.	0.506
AOL_s00007g423	AOL_s00083g185	G1X2B4	G1XGQ4	Cnd3 domain-containing protein.	Structural maintenance of chromosomes protein.	0.934
AOL_s00007g423	AOL_s00083g401	G1X2B4	G1XHC0	Cnd3 domain-containing protein.	SCD domain-containing protein.	0.416