34 items (Arthrobotrys oligospora) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOL_s00004g637	Uncharacterized protein. (159 aa)
	AOL_s00006g207	Uncharacterized protein. (141 aa)
	AOL_s00007g370	Ribos_L4_asso_C domain-containing protein. (369 aa)
	AOL_s00054g369	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (166 aa)
	AOL_s00054g921	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (172 aa)
	AOL_s00076g197	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (103 aa)
	AOL_s00076g198	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (74 aa)
	AOL_s00076g589	Uncharacterized protein. (193 aa)
	AOL_s00079g2	Uncharacterized protein. (247 aa)
	AOL_s00079g120	Uncharacterized protein. (160 aa)
	AOL_s00079g122	Ribosomal protein L37; Binds to the 23S rRNA. (101 aa)
	AOL_s00080g57	Uncharacterized protein. (120 aa)
	AOL_s00080g174	Uncharacterized protein. (114 aa)
	AOL_s00080g236	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	AOL_s00081g168	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	AOL_s00081g313	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (390 aa)
	AOL_s00083g141	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (70 aa)
	AOL_s00083g142	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	AOL_s00083g420	Uncharacterized protein. (130 aa)
	AOL_s00097g411	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (205 aa)
	AOL_s00097g642	Uncharacterized protein. (214 aa)
	AOL_s00109g130	Ribosomal_L23eN domain-containing protein. (152 aa)
	AOL_s00109g171	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	AOL_s00112g100	Uncharacterized protein. (141 aa)
	AOL_s00169g53	Uncharacterized protein. (199 aa)
	AOL_s00173g95	Uncharacterized protein. (125 aa)
	AOL_s00173g135	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (250 aa)
	AOL_s00193g3	Ribosomal_L7Ae domain-containing protein. (211 aa)
	AOL_s00193g154	Ribosomal_L18A domain-containing protein. (238 aa)
	AOL_s00215g561	Ribosomal_L28e domain-containing protein. (153 aa)
	AOL_s00215g11	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (199 aa)
	AOL_s00215g679	Ribosomal_L2_C domain-containing protein. (255 aa)
	AOL_s00215g706	Uncharacterized protein. (51 aa)
	AOL_s00215g800	KOW domain-containing protein. (134 aa)

Your Current Organism:

Arthrobotrys oligospora

NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOL_s00004g637	AOL_s00006g207	G1WZC6	G1X006	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00007g370	G1WZC6	G1X261	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.999
AOL_s00004g637	AOL_s00054g369	G1WZC6	G1X675	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
AOL_s00004g637	AOL_s00054g921	G1WZC6	G1X7K4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
AOL_s00004g637	AOL_s00076g197	G1WZC6	G1X990	Uncharacterized protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
AOL_s00004g637	AOL_s00076g198	G1WZC6	G1X991	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
AOL_s00004g637	AOL_s00076g589	G1WZC6	G1XAD1	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00079g120	G1WZC6	G1XD17	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00079g122	G1WZC6	G1XD19	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
AOL_s00004g637	AOL_s00079g2	G1WZC6	G1XCG7	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00080g174	G1WZC6	G1XED9	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00080g236	G1WZC6	G1XEK1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
AOL_s00004g637	AOL_s00080g57	G1WZC6	G1XE22	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00081g168	G1WZC6	G1XFM6	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
AOL_s00004g637	AOL_s00081g313	G1WZC6	G1XG20	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
AOL_s00004g637	AOL_s00083g141	G1WZC6	G1XGL0	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
AOL_s00004g637	AOL_s00083g142	G1WZC6	G1XGL1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.999
AOL_s00004g637	AOL_s00083g420	G1WZC6	G1XHD9	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00004g637	AOL_s00097g411	G1WZC6	G1XJ84	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
AOL_s00004g637	AOL_s00097g642	G1WZC6	G1XJW5	Uncharacterized protein.	Uncharacterized protein.	0.999