15 items (Arthrobotrys oligospora) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOL_s00006g207	Uncharacterized protein. (141 aa)
	AOL_s00007g370	Ribos_L4_asso_C domain-containing protein. (369 aa)
	AOL_s00054g369	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (166 aa)
	AOL_s00076g589	Uncharacterized protein. (193 aa)
	AOL_s00079g120	Uncharacterized protein. (160 aa)
	AOL_s00080g236	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	AOL_s00081g313	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (390 aa)
	AOL_s00097g411	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (205 aa)
	AOL_s00097g642	Uncharacterized protein. (214 aa)
	AOL_s00109g130	Ribosomal_L23eN domain-containing protein. (152 aa)
	AOL_s00112g100	Uncharacterized protein. (141 aa)
	AOL_s00169g53	Uncharacterized protein. (199 aa)
	AOL_s00215g561	Ribosomal_L28e domain-containing protein. (153 aa)
	AOL_s00215g11	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (199 aa)
	AOL_s00215g679	Ribosomal_L2_C domain-containing protein. (255 aa)

Your Current Organism:

Arthrobotrys oligospora

NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOL_s00006g207	AOL_s00007g370	G1X006	G1X261	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.999
AOL_s00006g207	AOL_s00054g369	G1X006	G1X675	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
AOL_s00006g207	AOL_s00076g589	G1X006	G1XAD1	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00006g207	AOL_s00079g120	G1X006	G1XD17	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00006g207	AOL_s00080g236	G1X006	G1XEK1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
AOL_s00006g207	AOL_s00081g313	G1X006	G1XG20	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
AOL_s00006g207	AOL_s00097g411	G1X006	G1XJ84	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
AOL_s00006g207	AOL_s00097g642	G1X006	G1XJW5	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00006g207	AOL_s00109g130	G1X006	G1XKA1	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein.	0.999
AOL_s00006g207	AOL_s00112g100	G1X006	G1XLS0	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00006g207	AOL_s00169g53	G1X006	G1XMK0	Uncharacterized protein.	Uncharacterized protein.	0.999
AOL_s00006g207	AOL_s00215g11	G1X006	G1XT82	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
AOL_s00006g207	AOL_s00215g561	G1X006	G1XT63	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.999
AOL_s00006g207	AOL_s00215g679	G1X006	G1XUM1	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.999
AOL_s00007g370	AOL_s00006g207	G1X261	G1X006	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.999
AOL_s00007g370	AOL_s00054g369	G1X261	G1X675	Ribos_L4_asso_C domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
AOL_s00007g370	AOL_s00076g589	G1X261	G1XAD1	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.999
AOL_s00007g370	AOL_s00079g120	G1X261	G1XD17	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.999
AOL_s00007g370	AOL_s00080g236	G1X261	G1XEK1	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
AOL_s00007g370	AOL_s00081g313	G1X261	G1XG20	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999