STRINGSTRING
ADJ62246.1 ADJ62246.1 rbsA rbsA ADJ62248.1 ADJ62248.1 ADJ62533.1 ADJ62533.1 ADJ62534.1 ADJ62534.1 ADJ62535.1 ADJ62535.1 ADJ62536.1 ADJ62536.1 rbsD rbsD ADJ62550.1 ADJ62550.1 ADJ62551.1 ADJ62551.1 ADJ62552.1 ADJ62552.1 ADJ62553.1 ADJ62553.1 ADJ62554.1 ADJ62554.1 ADJ62555.1 ADJ62555.1 ADJ62556.1 ADJ62556.1 rbsA-2 rbsA-2 ADJ62567.1 ADJ62567.1 ADJ62568.1 ADJ62568.1 ADJ62579.1 ADJ62579.1 rbsA-3 rbsA-3 rbsC rbsC ADJ63792.1 ADJ63792.1 ADJ63793.1 ADJ63793.1 ADJ63794.1 ADJ63794.1 ADJ63795.1 ADJ63795.1 rbsK-2 rbsK-2 rbsD-2 rbsD-2 ADJ65492.1 ADJ65492.1 ADJ65493.1 ADJ65493.1 ADJ65494.1 ADJ65494.1 ADJ65495.1 ADJ65495.1 fucK fucK ADJ65909.1 ADJ65909.1 ADJ65910.1 ADJ65910.1 ADJ65911.1 ADJ65911.1 ADJ65912.1 ADJ65912.1 ADJ65913.1 ADJ65913.1 ADJ65914.1 ADJ65914.1 ADJ65915.1 ADJ65915.1 rhaI rhaI xylR xylR xylF xylF xylG xylG xylH xylH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADJ62246.1ABC-type sugar transport system, periplasmic component protein. (316 aa)
rbsAABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (521 aa)
ADJ62248.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
ADJ62533.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (347 aa)
ADJ62534.1ABC-type sugar transport system, ATPase component protein. (520 aa)
ADJ62535.1ABC-type sugar transport system, periplasmic component protein. (335 aa)
ADJ62536.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
rbsDRbsD or FucU transport protein; Belongs to the RbsD / FucU family. (150 aa)
ADJ62550.1ABC-type sugar transport system, periplasmic component protein. (324 aa)
ADJ62551.1ABC-type sugar transport system, ATPase component protein. (516 aa)
ADJ62552.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (359 aa)
ADJ62553.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (340 aa)
ADJ62554.1ABC-type sugar transport system, periplasmic component protein. (357 aa)
ADJ62555.1ABC-type sugar transport system, ATPase component protein. (518 aa)
ADJ62556.1ABC-type sugar transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (405 aa)
rbsA-2ABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (520 aa)
ADJ62567.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (347 aa)
ADJ62568.1ABC-type sugar transport system, periplasmic component protein. (312 aa)
ADJ62579.1ABC-type sugar transport system, periplasmic component protein. (302 aa)
rbsA-3ABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (506 aa)
rbsCABC-type ribose/xylose/arabinose/galactoside transport system, permease component protein. (328 aa)
ADJ63792.1ABC-type sugar transport system, periplasmic component protein. (314 aa)
ADJ63793.1ABC-type sugar transport system, ATPase component protein. (522 aa)
ADJ63794.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (328 aa)
ADJ63795.1Transcription regulator DNA-binding repressor protein. (337 aa)
rbsK-2Sugar kinase protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (299 aa)
rbsD-2ABC-type sugar transport system, auxiliary component protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (130 aa)
ADJ65492.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (316 aa)
ADJ65493.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
ADJ65494.1ABC-type sugar transport system, ATPase component protein. (502 aa)
ADJ65495.1ABC-type sugar transport system, periplasmic component protein. (369 aa)
fucKL-fuculokinase protein. (478 aa)
ADJ65909.1Conserved hypothetical protein; S - Function unknown. (104 aa)
ADJ65910.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (342 aa)
ADJ65911.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (352 aa)
ADJ65912.1ABC-type sugar transport system, ATPase component protein. (546 aa)
ADJ65913.1ABC-type sugar transport system, periplasmic component protein. (344 aa)
ADJ65914.1DeoR family transcription regulator protein. (267 aa)
ADJ65915.1Sugar phosphate dehydrogenase oxidoreductase protein. (708 aa)
rhaIL-rhamnose isomerase protein. (431 aa)
xylRAraC family xylose operon transcription regulator protein. (442 aa)
xylFABC-type D-xylose transport system, periplasmic component protein. (338 aa)
xylGABC-type D-xylose transport system, ATPase component protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (518 aa)
xylHABC-type D-xylose transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (385 aa)
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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