67 items (Herbaspirillum seropedicae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADJ63952.1	PAS/PAC sensor hybrid histidine kinase protein. (552 aa)
	hydH	Two component sensor histidine kinase protein. (460 aa)
	cheA-2	Chemotaxis histidine kinase protein. (808 aa)
	ADJ63984.1	Two component heavy metal sensor histidine kinase protein; Member of a two-component regulatory system. (467 aa)
	ADJ63991.1	Bacteriophytochrome (light-regulated signal transduction histidine kinase) protein. (732 aa)
	ADJ63992.1	Two component sensor histidine kinase protein. (289 aa)
	ADJ63994.1	Two component sensor histidine kinase protein. (535 aa)
	ygiY	Transmembrane sensor histidine kinase transcription regulator protein. (468 aa)
	ADJ64070.1	Multi-sensor signal transduction histidine kinase protein. (475 aa)
	ADJ64071.1	Two component sensor histidine kinase protein. (633 aa)
	ADJ64094.1	Transmembrane sensor histidine kinase transcription regulator protein. (443 aa)
	ADJ64132.1	Sensor histidine kinase/response regulator protein. (1145 aa)
	ADJ64227.1	Sensory transduction histidine kinase protein. (706 aa)
	ADJ64260.1	Signal transduction histidine kinase protein. (356 aa)
	cheA-3	Signal-transducing histidine kinase CheA protein. (697 aa)
	cheA-4	Two component hybrid sensor histidine kinase/response regulator protein. (775 aa)
	czcS-2	Cobalt/zinc/cadmium resistance two component transmembrane sensor histidine kinase protein; Member of a two-component regulatory system. (475 aa)
	cheA-5	Chemotaxis CheA protein. (638 aa)
	ntrB	Nitrogen regulation (sensor histidine kinase) transcription regulator protein. (366 aa)
	dctB	C4-dicarboxylate transport sensor kinase transcription regulator protein. (600 aa)
	ADJ64858.1	Two-component system transcription regulator protein. (372 aa)
	ADJ64861.1	Two component hybrid sensor histidine kinase/response regulator protein. (1160 aa)
	ADJ64863.1	Periplasmic sensor signal transduction histidine kinase protein. (459 aa)
	ADJ64873.1	Transmembrane sensor kinase transcription regulator protein. (459 aa)
	ADJ64987.1	Two component sensor histidine kinase protein. (401 aa)
	narX	Transmembrane nitrate/nitrite sensor histidine kinase transcription regulator protein. (650 aa)
	ADJ65206.1	Two component sensor histidine kinase protein. (556 aa)
	ADJ65207.1	Hypothetical protein; S - Function unknown. (765 aa)
	ADJ65211.1	Two component transmembrane sensor histidine kinase protein. (454 aa)
	ADJ65213.1	Two component hybrid sensor histidine kinase/response regulator protein. (1524 aa)
	kdpD	Two component sensor histidine kinase protein. (939 aa)
	ADJ63989.1	Two component hybrid sensor histidine kinase/response regulator protein. (1278 aa)
	gyrB	DNA gyrase subunit B protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (832 aa)
	czcS	Sensor protein; Member of a two-component regulatory system. (467 aa)
	ntrY	Two component sensor histidine kinase protein. (760 aa)
	ADJ62066.1	Multi-sensor hybrid histidine kinase protein. (845 aa)
	ADJ62141.1	Chemotaxis histidine kinase protein. (725 aa)
	ADJ62164.1	Two component transmembrane sensor histidine kinase protein. (390 aa)
	ADJ62172.1	Sensor histidine kinase. (202 aa)
	ADJ66202.1	Two component sensor histidine kinase protein. (492 aa)
	ADJ66198.1	Two component sensor histidine kinase protein. (467 aa)
	ADJ66101.1	Two component sensor histidine kinase protein. (517 aa)
	baeS-2	Two-component system sensor histidine kinase protein. (475 aa)
	ADJ66013.1	Sensor histidine kinase protein. (478 aa)
	tctE	Two component sensor histidine kinase protein. (485 aa)
	ADJ65990.1	PAS/PAC HisKA ATPase_c domains containing sensor signal transduction histidine kinase protein. (524 aa)
	ADJ65863.1	Transmembrane sensor histidine kinase protein. (444 aa)
	ADJ65850.1	Two component sensor histidine kinase protein. (479 aa)
	ADJ65430.1	Two component transmembrane sensor histidine kinase protein. (361 aa)
	ADJ65317.1	CheA-like histidine kinase protein. (744 aa)
	dctS	C4-dicarboxylate transport sensor (histidine kinase) protein. (674 aa)
	vsrA	Transmembrane sensor histidine kinase protein. (677 aa)
	vsrB	Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein. (604 aa)
	ADJ62750.1	Hpt sensor hybrid histidine kinase protein. (723 aa)
	phoR	Phosphate regulon two-component sensor kinase transcription regulator protein. (436 aa)
	ADJ62861.1	Two component transmembrane sensor histidine kinase protein. (508 aa)
	ADJ62881.1	Two component hybrid sensor histidine kinase/response regulator protein. (916 aa)
	envZ	Two component sensor histidine kinase protein. (465 aa)
	cheA	Chemotaxis histidine kinase protein. (837 aa)
	htpG	HSP90 family high temperature molecular chaperone G protein; Molecular chaperone. Has ATPase activity. (636 aa)
	parE	DNA topoisomerase IV subunit B protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (662 aa)
	ADJ63456.1	Two component sensor histidine kinase protein. (401 aa)
	ADJ63466.1	Transmembrane sensor histidine kinase transcription regulator protein. (464 aa)
	risS	Oxidative stress resistance two component transmembrane sensor histidine kinase protein. (455 aa)
	ADJ63698.1	Two component sensor histidine kinase protein. (473 aa)
	ADJ63801.1	PAS/PAC sensor hybrid histidine kinase response regulator protein. (688 aa)
	baeS	Signal transduction histidine kinase protein. (446 aa)

Your Current Organism:

Herbaspirillum seropedicae

NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADJ62066.1	ADJ62141.1	Hsero_0547	Hsero_0622	Multi-sensor hybrid histidine kinase protein.	Chemotaxis histidine kinase protein.	0.616
ADJ62066.1	ADJ62164.1	Hsero_0547	Hsero_0645	Multi-sensor hybrid histidine kinase protein.	Two component transmembrane sensor histidine kinase protein.	0.627
ADJ62066.1	ADJ62172.1	Hsero_0547	Hsero_0653	Multi-sensor hybrid histidine kinase protein.	Sensor histidine kinase.	0.456
ADJ62066.1	ADJ62750.1	Hsero_0547	Hsero_1234	Multi-sensor hybrid histidine kinase protein.	Hpt sensor hybrid histidine kinase protein.	0.996
ADJ62066.1	ADJ62861.1	Hsero_0547	Hsero_1345	Multi-sensor hybrid histidine kinase protein.	Two component transmembrane sensor histidine kinase protein.	0.809
ADJ62066.1	ADJ62881.1	Hsero_0547	Hsero_1365	Multi-sensor hybrid histidine kinase protein.	Two component hybrid sensor histidine kinase/response regulator protein.	0.978
ADJ62066.1	ADJ63456.1	Hsero_0547	Hsero_1952	Multi-sensor hybrid histidine kinase protein.	Two component sensor histidine kinase protein.	0.676
ADJ62066.1	ADJ63698.1	Hsero_0547	Hsero_2199	Multi-sensor hybrid histidine kinase protein.	Two component sensor histidine kinase protein.	0.627
ADJ62066.1	ADJ63801.1	Hsero_0547	Hsero_2302	Multi-sensor hybrid histidine kinase protein.	PAS/PAC sensor hybrid histidine kinase response regulator protein.	0.986
ADJ62066.1	ADJ63952.1	Hsero_0547	Hsero_2453	Multi-sensor hybrid histidine kinase protein.	PAS/PAC sensor hybrid histidine kinase protein.	0.988
ADJ62066.1	ADJ63984.1	Hsero_0547	Hsero_2485	Multi-sensor hybrid histidine kinase protein.	Two component heavy metal sensor histidine kinase protein; Member of a two-component regulatory system.	0.682
ADJ62066.1	ADJ63989.1	Hsero_0547	Hsero_2490	Multi-sensor hybrid histidine kinase protein.	Two component hybrid sensor histidine kinase/response regulator protein.	0.998
ADJ62066.1	ADJ63991.1	Hsero_0547	Hsero_2492	Multi-sensor hybrid histidine kinase protein.	Bacteriophytochrome (light-regulated signal transduction histidine kinase) protein.	0.710
ADJ62066.1	ADJ63992.1	Hsero_0547	Hsero_2493	Multi-sensor hybrid histidine kinase protein.	Two component sensor histidine kinase protein.	0.986
ADJ62066.1	ADJ63994.1	Hsero_0547	Hsero_2495	Multi-sensor hybrid histidine kinase protein.	Two component sensor histidine kinase protein.	0.813
ADJ62066.1	ADJ64070.1	Hsero_0547	Hsero_2571	Multi-sensor hybrid histidine kinase protein.	Multi-sensor signal transduction histidine kinase protein.	0.976
ADJ62066.1	ADJ64071.1	Hsero_0547	Hsero_2572	Multi-sensor hybrid histidine kinase protein.	Two component sensor histidine kinase protein.	0.926
ADJ62066.1	ADJ64094.1	Hsero_0547	Hsero_2598	Multi-sensor hybrid histidine kinase protein.	Transmembrane sensor histidine kinase transcription regulator protein.	0.650
ADJ62066.1	ADJ64132.1	Hsero_0547	Hsero_2636	Multi-sensor hybrid histidine kinase protein.	Sensor histidine kinase/response regulator protein.	0.977
ADJ62066.1	ADJ64227.1	Hsero_0547	Hsero_2731	Multi-sensor hybrid histidine kinase protein.	Sensory transduction histidine kinase protein.	0.627

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