STRINGSTRING
ADJ62560.1 ADJ62560.1 ADJ65241.1 ADJ65241.1 alaS alaS ADJ65006.1 ADJ65006.1 ADJ64375.1 ADJ64375.1 ompC-3 ompC-3 ibpA ibpA fkpA fkpA ompC-2 ompC-2 ADJ62847.1 ADJ62847.1 ompC ompC ADJ62512.1 ADJ62512.1 ADJ61711.1 ADJ61711.1 ADJ65729.1 ADJ65729.1 ADJ65764.1 ADJ65764.1 ADJ65997.1 ADJ65997.1 ADJ65411.1 ADJ65411.1 ompC-4 ompC-4 ADJ65579.1 ADJ65579.1 ADJ63891.1 ADJ63891.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADJ62560.1Outer membrane (porin) protein. (355 aa)
ADJ65241.1Porin signal peptide protein. (380 aa)
alaSalanyl-tRNA synthetase protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (874 aa)
ADJ65006.1Conserved hypothetical protein; S - Function unknown. (563 aa)
ADJ64375.1Outer membrane (porin) protein. (372 aa)
ompC-3Outer membrane porin protein. (374 aa)
ibpAMolecular chaperone (16 kDa) heat shock protein A; Belongs to the small heat shock protein (HSP20) family. (150 aa)
fkpAFKBP-type peptidyl-prolyl cis-trans isomerase I protein. (118 aa)
ompC-2Outer membrane protein (porin) signal peptide protein. (352 aa)
ADJ62847.1Outer membrane porin, OmpC family protein. (346 aa)
ompCOuter membrane porin protein. (369 aa)
ADJ62512.1Porin signal peptide protein. (405 aa)
ADJ61711.1Outer membrane protein (porin) signal peptide protein. (390 aa)
ADJ65729.1Porin precursor transmembrane protein. (360 aa)
ADJ65764.1Outer membrane (porin) protein. (387 aa)
ADJ65997.1Transmembrane outer membrane porin signal peptide protein. (354 aa)
ADJ65411.1Conserved hypothetical protein; S - Function unknown. (581 aa)
ompC-4Porin transmembrane protein. (365 aa)
ADJ65579.1Porin transmembrane protein. (403 aa)
ADJ63891.1Molecular chaperone, small heat shock protein; Belongs to the small heat shock protein (HSP20) family. (149 aa)
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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