STRINGSTRING
hrpX hrpX hrcC hrcC hrpL hrpL fliH fliH hrcN hrcN hrcS hrcS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hrpXType III secretion HprX protein. (262 aa)
hrcCType II/III HrcC transmembrane protein. (693 aa)
hrpLRNA polymerase sigma-24 factor protein; Belongs to the sigma-70 factor family. ECF subfamily. (244 aa)
fliHFlagellar assembly FliH protein. (233 aa)
hrcNType III secretion ATP synthase protein. (460 aa)
hrcSType III secretion HrcS protein. (87 aa)
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.