STRINGSTRING
galU galU galU-2 galU-2 cheW-3 cheW-3 cheW-4 cheW-4 cheW cheW pilT pilT arsB arsB rimL-2 rimL-2 cheW-2 cheW-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
galUUTP-glucose-1-phosphate uridylyltransferase protein. (297 aa)
galU-2UTP-glucose-1-phosphate uridylyltransferase protein. (307 aa)
cheW-3CheW chemotaxis protein, positive regulator of CheA protein activity. (168 aa)
cheW-4Chemotaxis signal transduction protein. (211 aa)
cheWPositive regulator of CheA protein activity protein. (194 aa)
pilTTwitching mobility PilT protein. (365 aa)
arsBNA+/H+ antiporter permease protein. (476 aa)
rimL-2Acetyltransferase protein. (195 aa)
cheW-2Chemotaxis signal transduction protein. (516 aa)
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.