29 items (Herbaspirillum seropedicae) - STRING interaction network

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Your Input:
	hfq	RNA chaperone Hfq protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (79 aa)
	tldD-2	Zn-dependent protease TldD protein. (501 aa)
	cheA-2	Chemotaxis histidine kinase protein. (808 aa)
	vapC	Plasmid stabilization protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)
	fliH	Flagellar assembly FliH protein. (233 aa)
	cheA-3	Signal-transducing histidine kinase CheA protein. (697 aa)
	flgK	Flagellar hook-associated FlgK protein; Belongs to the flagella basal body rod proteins family. (778 aa)
	flgN	Flagellar biosynthesis/type III secretory pathway chaperone protein. (152 aa)
	fliA	RNA polymerase sigma factor for flagellar operon (sigma-F factor) protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (244 aa)
	nagZ	beta-N-acetylhexosaminidase protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (342 aa)
	feoB	Ferrous iron transport B transmembrane protein. (608 aa)
	tufB	EF-Tu elongation factor protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
	acrR	Transcription regulator protein. (211 aa)
	cheW	Positive regulator of CheA protein activity protein. (194 aa)
	groEL1	Chaperonin GroEL (HSP60) protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (549 aa)
	tldD	Zn-dependent protease protein. (486 aa)
	cysB	Cys regulon transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (311 aa)
	cheW-2	Chemotaxis signal transduction protein. (516 aa)
	cheA	Chemotaxis histidine kinase protein. (837 aa)
	parE	DNA topoisomerase IV subunit B protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (662 aa)
	pmbA	Zn-dependent protease protein. (454 aa)
	acrR-2	Transcription regulator protein. (206 aa)
	fimV	Transmembrane Tfp pilus assembly FimV protein. (896 aa)
	cheW-3	CheW chemotaxis protein, positive regulator of CheA protein activity. (168 aa)
	cysB-2	Cys regulon transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (313 aa)
	cheA-5	Chemotaxis CheA protein. (638 aa)
	cheW-4	Chemotaxis signal transduction protein. (211 aa)
	cheA-4	Two component hybrid sensor histidine kinase/response regulator protein. (775 aa)
	groEL	Chaperonin GroEL protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (540 aa)

Your Current Organism:

Herbaspirillum seropedicae

NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cheA	cheA-4	Hsero_1704	Hsero_3018	Chemotaxis histidine kinase protein.	Two component hybrid sensor histidine kinase/response regulator protein.	0.614
cheA	cheW	Hsero_1704	Hsero_0624	Chemotaxis histidine kinase protein.	Positive regulator of CheA protein activity protein.	0.991
cheA	cheW-2	Hsero_1704	Hsero_1699	Chemotaxis histidine kinase protein.	Chemotaxis signal transduction protein.	0.997
cheA	cheW-3	Hsero_1704	Hsero_2981	Chemotaxis histidine kinase protein.	CheW chemotaxis protein, positive regulator of CheA protein activity.	0.981
cheA	cheW-4	Hsero_1704	Hsero_3019	Chemotaxis histidine kinase protein.	Chemotaxis signal transduction protein.	0.836
cheA	flgK	Hsero_1704	Hsero_2042	Chemotaxis histidine kinase protein.	Flagellar hook-associated FlgK protein; Belongs to the flagella basal body rod proteins family.	0.584
cheA	flgN	Hsero_1704	Hsero_2030	Chemotaxis histidine kinase protein.	Flagellar biosynthesis/type III secretory pathway chaperone protein.	0.422
cheA	fliA	Hsero_1704	Hsero_2029	Chemotaxis histidine kinase protein.	RNA polymerase sigma factor for flagellar operon (sigma-F factor) protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.	0.599
cheA	fliH	Hsero_1704	Hsero_2057	Chemotaxis histidine kinase protein.	Flagellar assembly FliH protein.	0.481
cheA-2	cheA-4	Hsero_2474	Hsero_3018	Chemotaxis histidine kinase protein.	Two component hybrid sensor histidine kinase/response regulator protein.	0.507
cheA-2	cheW	Hsero_2474	Hsero_0624	Chemotaxis histidine kinase protein.	Positive regulator of CheA protein activity protein.	0.981
cheA-2	cheW-2	Hsero_2474	Hsero_1699	Chemotaxis histidine kinase protein.	Chemotaxis signal transduction protein.	0.971
cheA-2	cheW-3	Hsero_2474	Hsero_2981	Chemotaxis histidine kinase protein.	CheW chemotaxis protein, positive regulator of CheA protein activity.	0.971
cheA-2	cheW-4	Hsero_2474	Hsero_3019	Chemotaxis histidine kinase protein.	Chemotaxis signal transduction protein.	0.812
cheA-2	flgK	Hsero_2474	Hsero_2042	Chemotaxis histidine kinase protein.	Flagellar hook-associated FlgK protein; Belongs to the flagella basal body rod proteins family.	0.584
cheA-2	flgN	Hsero_2474	Hsero_2030	Chemotaxis histidine kinase protein.	Flagellar biosynthesis/type III secretory pathway chaperone protein.	0.422
cheA-2	fliA	Hsero_2474	Hsero_2029	Chemotaxis histidine kinase protein.	RNA polymerase sigma factor for flagellar operon (sigma-F factor) protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.	0.599
cheA-2	fliH	Hsero_2474	Hsero_2057	Chemotaxis histidine kinase protein.	Flagellar assembly FliH protein.	0.481
cheA-3	cheA-4	Hsero_2982	Hsero_3018	Signal-transducing histidine kinase CheA protein.	Two component hybrid sensor histidine kinase/response regulator protein.	0.575
cheA-3	cheW	Hsero_2982	Hsero_0624	Signal-transducing histidine kinase CheA protein.	Positive regulator of CheA protein activity protein.	0.991

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