15 items (Scyliorhinus torazame) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	scyTo_0017565	Uncharacterized protein. (271 aa)
	scyTo_0020082	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (291 aa)
	scyTo_0020769	THF_DHG_CYH domain-containing protein. (150 aa)
	scyTo_0023815	SHMT domain-containing protein. (89 aa)
	scyTo_0017399	Uncharacterized protein. (176 aa)
	scyTo_0020992	FTCD_C domain-containing protein. (125 aa)
	scyTo_0017564	Uncharacterized protein. (674 aa)
	scyTo_0020030	Uncharacterized protein. (380 aa)
	scyTo_0012910	Uncharacterized protein. (139 aa)
	scyTo_0026365	FTCD_C domain-containing protein. (101 aa)
	scyTo_0024164	Uncharacterized protein. (67 aa)
	scyTo_0022207	Uncharacterized protein. (48 aa)
	scyTo_0004849	Uncharacterized protein. (331 aa)
	scyTo_0010460	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (654 aa)
	scyTo_0002857	Uncharacterized protein. (243 aa)

Your Current Organism:

Scyliorhinus torazame

NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
scyTo_0002857	scyTo_0004849	A0A401PKZ1	A0A401NY07	Uncharacterized protein.	Uncharacterized protein.	0.908
scyTo_0002857	scyTo_0010460	A0A401PKZ1	A0A401P6U6	Uncharacterized protein.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.853
scyTo_0002857	scyTo_0012910	A0A401PKZ1	A0A401NKK8	Uncharacterized protein.	Uncharacterized protein.	0.902
scyTo_0002857	scyTo_0017399	A0A401PKZ1	A0A401PS06	Uncharacterized protein.	Uncharacterized protein.	0.814
scyTo_0002857	scyTo_0017564	A0A401PKZ1	A0A401PVN1	Uncharacterized protein.	Uncharacterized protein.	0.883
scyTo_0002857	scyTo_0017565	A0A401PKZ1	A0A401PVR8	Uncharacterized protein.	Uncharacterized protein.	0.734
scyTo_0002857	scyTo_0020030	A0A401PKZ1	A0A401PXH3	Uncharacterized protein.	Uncharacterized protein.	0.814
scyTo_0002857	scyTo_0020082	A0A401PKZ1	A0A401PYM3	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.866
scyTo_0002857	scyTo_0020769	A0A401PKZ1	A0A401Q1W6	Uncharacterized protein.	THF_DHG_CYH domain-containing protein.	0.814
scyTo_0002857	scyTo_0020992	A0A401PKZ1	A0A401PT51	Uncharacterized protein.	FTCD_C domain-containing protein.	0.651
scyTo_0002857	scyTo_0022207	A0A401PKZ1	A0A401Q8C1	Uncharacterized protein.	Uncharacterized protein.	0.814
scyTo_0002857	scyTo_0023815	A0A401PKZ1	A0A401QCK8	Uncharacterized protein.	SHMT domain-containing protein.	0.866
scyTo_0002857	scyTo_0024164	A0A401PKZ1	A0A401QE76	Uncharacterized protein.	Uncharacterized protein.	0.803
scyTo_0002857	scyTo_0026365	A0A401PKZ1	A0A401QJW0	Uncharacterized protein.	FTCD_C domain-containing protein.	0.523
scyTo_0004849	scyTo_0002857	A0A401NY07	A0A401PKZ1	Uncharacterized protein.	Uncharacterized protein.	0.908
scyTo_0004849	scyTo_0010460	A0A401NY07	A0A401P6U6	Uncharacterized protein.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.947
scyTo_0004849	scyTo_0012910	A0A401NY07	A0A401NKK8	Uncharacterized protein.	Uncharacterized protein.	0.937
scyTo_0004849	scyTo_0017399	A0A401NY07	A0A401PS06	Uncharacterized protein.	Uncharacterized protein.	0.989
scyTo_0004849	scyTo_0017564	A0A401NY07	A0A401PVN1	Uncharacterized protein.	Uncharacterized protein.	0.937
scyTo_0004849	scyTo_0017565	A0A401NY07	A0A401PVR8	Uncharacterized protein.	Uncharacterized protein.	0.985