STRINGSTRING
cydB cydB cydA_1 cydA_1 NCTC8284_02227 NCTC8284_02227 NCTC8284_02226 NCTC8284_02226 potA potA potB_1 potB_1 potC potC potD_2 potD_2 thiQ_1 thiQ_1 thiP_1 thiP_1 tbpA_1 tbpA_1 grxD grxD NCTC8284_03051 NCTC8284_03051 NCTC8284_03052 NCTC8284_03052 lemA lemA GCA_000730685_01208 GCA_000730685_01208 cydD_2 cydD_2 cydC cydC afuC afuC afuB1_1 afuB1_1 afuB1_2 afuB1_2 afuA_1 afuA_1 NCTC8284_03240 NCTC8284_03240 NCTC8284_03296 NCTC8284_03296 fbpC1_3 fbpC1_3 fbpB_1 fbpB_1 fbpA_1 fbpA_1 bolA bolA potD2 potD2 potD3 potD3 ordL_3 ordL_3 NCTC8284_00198 NCTC8284_00198 cydD_1 cydD_1 D3M78_09600 D3M78_09600 NCTC8284_00210 NCTC8284_00210 yoaT yoaT NCTC8284_00216 NCTC8284_00216
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cydBUnannotated protein. (378 aa)
cydA_1Unannotated protein. (521 aa)
NCTC8284_02227Unannotated protein. (96 aa)
NCTC8284_02226Unannotated protein. (54 aa)
potAUnannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (398 aa)
potB_1Unannotated protein. (286 aa)
potCUnannotated protein. (256 aa)
potD_2Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (360 aa)
thiQ_1Unannotated protein. (209 aa)
thiP_1Unannotated protein. (534 aa)
tbpA_1Unannotated protein. (332 aa)
grxDUnannotated protein; Belongs to the glutaredoxin family. Monothiol subfamily. (108 aa)
NCTC8284_03051Unannotated protein. (266 aa)
NCTC8284_03052Unannotated protein. (150 aa)
lemAUnannotated protein. (193 aa)
GCA_000730685_01208Unannotated protein. (40 aa)
cydD_2Unannotated protein. (586 aa)
cydCUnannotated protein. (575 aa)
afuCUnannotated protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (348 aa)
afuB1_1Unannotated protein. (441 aa)
afuB1_2Unannotated protein. (255 aa)
afuA_1Unannotated protein. (346 aa)
NCTC8284_03240Unannotated protein. (346 aa)
NCTC8284_03296Unannotated protein. (243 aa)
fbpC1_3Unannotated protein. (339 aa)
fbpB_1Unannotated protein. (549 aa)
fbpA_1Unannotated protein. (338 aa)
bolAUnannotated protein; Belongs to the BolA/IbaG family. (103 aa)
potD2Unannotated protein. (348 aa)
potD3Unannotated protein. (350 aa)
ordL_3Unannotated protein. (431 aa)
NCTC8284_00198Unannotated protein. (552 aa)
cydD_1Unannotated protein. (581 aa)
D3M78_09600Unannotated protein. (96 aa)
NCTC8284_00210Unannotated protein. (151 aa)
yoaTUnannotated protein. (281 aa)
NCTC8284_00216Unannotated protein. (131 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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