STRINGSTRING
hxuC hxuC ccmB ccmB nrfE_2 nrfE_2 ccmF ccmF ccmA_1 ccmA_1 ccmC ccmC ccmD ccmD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hxuCUnannotated protein. (679 aa)
ccmBUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (221 aa)
nrfE_2Unannotated protein. (635 aa)
ccmFUnannotated protein. (648 aa)
ccmA_1Unannotated protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. (212 aa)
ccmCUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (247 aa)
ccmDUnannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (68 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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