STRINGSTRING
hbpA_1 hbpA_1 fecB_1 fecB_1 rbsB1_1 rbsB1_1 xylF xylF tonB_1 tonB_1 mglB_2 mglB_2 ccmG ccmG rbsB2 rbsB2 mltB mltB oppA_1 oppA_1 artI_3 artI_3 prc_1 prc_1 NCTC8284_01600 NCTC8284_01600 tbpA_1 tbpA_1 yiaO yiaO yiiZ_4 yiiZ_4 dctP_2 dctP_2 NCTC8284_03324 NCTC8284_03324 siaP_1 siaP_1 dsbE dsbE oppA_4 oppA_4 mepA mepA modA modA sapA_2 sapA_2 fhuD fhuD rbsB1_2 rbsB1_2 rbsB rbsB ydeU_2 ydeU_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hbpA_1Unannotated protein. (546 aa)
fecB_1Unannotated protein. (297 aa)
rbsB1_1Unannotated protein. (315 aa)
xylFUnannotated protein. (332 aa)
tonB_1Unannotated protein. (256 aa)
mglB_2Unannotated protein. (331 aa)
ccmGUnannotated protein. (182 aa)
rbsB2Unannotated protein. (309 aa)
mltBUnannotated protein. (368 aa)
oppA_1Unannotated protein. (545 aa)
artI_3Unannotated protein. (285 aa)
prc_1Unannotated protein; Belongs to the peptidase S41A family. (691 aa)
NCTC8284_01600Unannotated protein. (193 aa)
tbpA_1Unannotated protein. (332 aa)
yiaOUnannotated protein. (328 aa)
yiiZ_4Unannotated protein. (330 aa)
dctP_2Unannotated protein. (328 aa)
NCTC8284_03324Unannotated protein. (369 aa)
siaP_1Unannotated protein. (327 aa)
dsbEUnannotated protein. (176 aa)
oppA_4Unannotated protein. (518 aa)
mepAUnannotated protein; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. (286 aa)
modAUnannotated protein. (254 aa)
sapA_2Unannotated protein. (551 aa)
fhuDUnannotated protein. (322 aa)
rbsB1_2Unannotated protein. (312 aa)
rbsBUnannotated protein. (310 aa)
ydeU_2Unannotated protein. (1012 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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