STRINGSTRING
yiiZ_4 yiiZ_4 GCA_000730685_02223 GCA_000730685_02223 lspB2_2 lspB2_2 skp skp yaeT_2 yaeT_2 hasR_1 hasR_1 hel_2 hel_2 YadA YadA GCA_000730685_02009 GCA_000730685_02009 hbpA_1 hbpA_1 lppB_3 lppB_3 pnxIIIE pnxIIIE oppA_1 oppA_1 lptD_1 lptD_1 fecB_1 fecB_1 hsf2_6 hsf2_6 NCTC8284_00288 NCTC8284_00288 rbsB1_1 rbsB1_1 hsf2_1 hsf2_1 ompH1 ompH1 comE comE glpQ_1 glpQ_1 NCTC8284_03960 NCTC8284_03960 metQ_3 metQ_3 metN_1 metN_1 xylF xylF NCTC8284_00655 NCTC8284_00655 NCTC8284_00678 NCTC8284_00678 NCTC8284_00692 NCTC8284_00692 NCTC8284_00693 NCTC8284_00693 hsf2_11 hsf2_11 lptE lptE nqrE nqrE btuB_2 btuB_2 NCTC8284_03478 NCTC8284_03478 tonB_1 tonB_1 dsbE dsbE siaP_1 siaP_1 ompH2_2 ompH2_2 tbpB tbpB NCTC8284_03324 NCTC8284_03324 dctP_2 dctP_2 yiaO yiaO tbpA_1 tbpA_1 wecA_1 wecA_1 opa opa NCTC8284_01587 NCTC8284_01587 NCTC8284_01600 NCTC8284_01600 lppC_1 lppC_1 prc_1 prc_1 artI_3 artI_3 mltB mltB lolB_2 lolB_2 fcuA_2 fcuA_2 rbsB2 rbsB2 hxuC hxuC GCA_000730685_00770 GCA_000730685_00770 GCA_000730685_00758 GCA_000730685_00758 mltC_1 mltC_1 smpA smpA shlB_1 shlB_1 rlpA rlpA lst lst NCTC8284_01194 NCTC8284_01194 NCTC8284_01195 NCTC8284_01195 fadL fadL pal pal ccmG ccmG mglB_2 mglB_2 NCTC8284_01484 NCTC8284_01484 GCA_000730685_02214 GCA_000730685_02214 rbsB1_2 rbsB1_2 rbsB rbsB NCTC8284_03636 NCTC8284_03636 ydeU_2 ydeU_2 mltF_3 mltF_3 NCTC8284_03707 NCTC8284_03707 NCTC8284_02900 NCTC8284_02900 oppA_4 oppA_4 mepA mepA msbB_1 msbB_1 modA modA shlB_3 shlB_3 sapA_2 sapA_2 fcuA_3 fcuA_3 fhuD fhuD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yiiZ_4Unannotated protein. (330 aa)
GCA_000730685_02223Unannotated protein. (359 aa)
lspB2_2Unannotated protein. (561 aa)
skpUnannotated protein. (203 aa)
yaeT_2Unannotated protein. (793 aa)
hasR_1Unannotated protein. (995 aa)
hel_2Unannotated protein. (273 aa)
YadAUnannotated protein. (2935 aa)
GCA_000730685_02009Unannotated protein. (65 aa)
hbpA_1Unannotated protein. (546 aa)
lppB_3Unannotated protein. (394 aa)
pnxIIIEUnannotated protein. (289 aa)
oppA_1Unannotated protein. (545 aa)
lptD_1Unannotated protein. (781 aa)
fecB_1Unannotated protein. (297 aa)
hsf2_6Unannotated protein. (4267 aa)
NCTC8284_00288Unannotated protein. (578 aa)
rbsB1_1Unannotated protein. (315 aa)
hsf2_1Unannotated protein. (720 aa)
ompH1Unannotated protein. (377 aa)
comEUnannotated protein. (460 aa)
glpQ_1Unannotated protein. (363 aa)
NCTC8284_03960Unannotated protein. (784 aa)
metQ_3Unannotated protein. (274 aa)
metN_1Unannotated protein. (345 aa)
xylFUnannotated protein. (332 aa)
NCTC8284_00655Unannotated protein. (316 aa)
NCTC8284_00678Unannotated protein. (1734 aa)
NCTC8284_00692Unannotated protein. (476 aa)
NCTC8284_00693Unannotated protein. (407 aa)
hsf2_11Unannotated protein. (2668 aa)
lptEUnannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (167 aa)
nqrEUnannotated protein; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. (198 aa)
btuB_2Unannotated protein. (647 aa)
NCTC8284_03478Unannotated protein. (334 aa)
tonB_1Unannotated protein. (256 aa)
dsbEUnannotated protein. (176 aa)
siaP_1Unannotated protein. (327 aa)
ompH2_2Unannotated protein. (365 aa)
tbpBUnannotated protein. (323 aa)
NCTC8284_03324Unannotated protein. (369 aa)
dctP_2Unannotated protein. (328 aa)
yiaOUnannotated protein. (328 aa)
tbpA_1Unannotated protein. (332 aa)
wecA_1Unannotated protein. (366 aa)
opaUnannotated protein. (169 aa)
NCTC8284_01587Unannotated protein. (684 aa)
NCTC8284_01600Unannotated protein. (193 aa)
lppC_1Unannotated protein. (573 aa)
prc_1Unannotated protein; Belongs to the peptidase S41A family. (691 aa)
artI_3Unannotated protein. (285 aa)
mltBUnannotated protein. (368 aa)
lolB_2Unannotated protein. (206 aa)
fcuA_2Unannotated protein. (726 aa)
rbsB2Unannotated protein. (309 aa)
hxuCUnannotated protein. (679 aa)
GCA_000730685_00770Unannotated protein. (294 aa)
GCA_000730685_00758Unannotated protein. (375 aa)
mltC_1Unannotated protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (359 aa)
smpAUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (137 aa)
shlB_1Unannotated protein. (545 aa)
rlpAUnannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (287 aa)
lstUnannotated protein. (316 aa)
NCTC8284_01194Unannotated protein. (442 aa)
NCTC8284_01195Unannotated protein. (356 aa)
fadLUnannotated protein. (441 aa)
palUnannotated protein. (156 aa)
ccmGUnannotated protein. (182 aa)
mglB_2Unannotated protein. (331 aa)
NCTC8284_01484Unannotated protein. (3354 aa)
GCA_000730685_02214Unannotated protein. (647 aa)
rbsB1_2Unannotated protein. (312 aa)
rbsBUnannotated protein. (310 aa)
NCTC8284_03636Unannotated protein; Acts as a multifunctional adhesin involved in direct interactions with host epithelial cells and host proteins. (155 aa)
ydeU_2Unannotated protein. (1012 aa)
mltF_3Unannotated protein. (473 aa)
NCTC8284_03707Unannotated protein. (263 aa)
NCTC8284_02900Unannotated protein. (171 aa)
oppA_4Unannotated protein. (518 aa)
mepAUnannotated protein; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. (286 aa)
msbB_1Unannotated protein. (318 aa)
modAUnannotated protein. (254 aa)
shlB_3Unannotated protein. (594 aa)
sapA_2Unannotated protein. (551 aa)
fcuA_3Unannotated protein. (722 aa)
fhuDUnannotated protein. (322 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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