STRINGSTRING
rbsC2_1 rbsC2_1 rbsC2_2 rbsC2_2 rbsC1 rbsC1 mglC mglC xylH xylH rbsC3_2 rbsC3_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsC2_1Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
rbsC2_2Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (317 aa)
rbsC1Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
mglCUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
xylHUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (375 aa)
rbsC3_2Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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