STRINGSTRING
rbsB1_2 rbsB1_2 rbsR rbsR rbsB1_1 rbsB1_1 xylR xylR xylF xylF NCTC8284_03324 NCTC8284_03324 rsmC_2 rsmC_2 purR_2 purR_2 rbsB2 rbsB2 lppC_1 lppC_1 galR_1 galR_1 mglB_2 mglB_2 rbsB rbsB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsB1_2Unannotated protein. (312 aa)
rbsRUnannotated protein. (338 aa)
rbsB1_1Unannotated protein. (315 aa)
xylRUnannotated protein. (389 aa)
xylFUnannotated protein. (332 aa)
NCTC8284_03324Unannotated protein. (369 aa)
rsmC_2Unannotated protein; Belongs to the methyltransferase superfamily. (313 aa)
purR_2Unannotated protein. (338 aa)
rbsB2Unannotated protein. (309 aa)
lppC_1Unannotated protein. (573 aa)
galR_1Unannotated protein. (333 aa)
mglB_2Unannotated protein. (331 aa)
rbsBUnannotated protein. (310 aa)
Your Current Organism:
Rodentibacter pneumotropicus
NCBI taxonomy Id: 758
Other names: ATCC 35149, CCUG 12398, CIP 66.16, DSM 21403, JCM 14074, LMG 4224, LMG:4224, NCTC 8141, Pasteurella pneumotropica, Pasteurellaceae bacterium Ac63, R. pneumotropicus
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