STRINGSTRING
CTHT_0004460 CTHT_0004460 CTHT_0001260 CTHT_0001260 CTHT_0002690 CTHT_0002690 CTHT_0002930 CTHT_0002930 CTHT_0003460 CTHT_0003460 CTHT_0034600 CTHT_0034600 CTHT_0035020 CTHT_0035020 CTHT_0029340 CTHT_0029340 CTHT_0044720 CTHT_0044720 CTHT_0041450 CTHT_0041450 CTHT_0058140 CTHT_0058140 CTHT_0052580 CTHT_0052580 CTHT_0060790 CTHT_0060790 CTHT_0061570 CTHT_0061570 CTHT_0066340 CTHT_0066340 CTHT_0069020 CTHT_0069020 CTHT_0069870 CTHT_0069870
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CTHT_0004460Putative transcription factor. (429 aa)
CTHT_0001260RNA polymerase II transcription factor B 73 kDa subunit-like protein. (677 aa)
CTHT_0002690General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (534 aa)
CTHT_0002930Helicase ATP-binding domain-containing protein. (780 aa)
CTHT_0003460Putative transcription initiation factor. (350 aa)
CTHT_0034600Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (142 aa)
CTHT_0035020TFIIB-type domain-containing protein. (352 aa)
CTHT_0029340Transcription initiation factor IIF subunit alpha-like protein. (758 aa)
CTHT_0044720RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (514 aa)
CTHT_0041450Putative transcription initiation factor. (663 aa)
CTHT_0058140Transcription factor TFIIA-like protein. (392 aa)
CTHT_0052580Uncharacterized protein. (72 aa)
CTHT_0060790RING-type domain-containing protein. (363 aa)
CTHT_0061570Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (437 aa)
CTHT_0066340Transcription initiation factor TFIIE (Alpha subunit)-like protein. (350 aa)
CTHT_0069020CYCLIN domain-containing protein; Belongs to the cyclin family. (425 aa)
CTHT_0069870DNA repair helicase-like protein. (867 aa)
Your Current Organism:
Chaetomium thermophilum
NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495
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