(7 nodes) RNA polymerase I complex network (Chaetomium thermophilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTHT_0002960	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1713 aa)
	CTHT_0030140	RNA polymerases I, II, and III-like protein. (547 aa)
	CTHT_0030280	SAP30_Sin3_bdg domain-containing protein. (200 aa)
	CTHT_0033930	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (154 aa)
	CTHT_0035920	Uncharacterized protein. (80 aa)
	CTHT_0057070	DNA-directed RNA polymerases I and III 40 kDa polypeptide-like protein. (374 aa)
	CTHT_0058280	RNA polymerases I, II, and III-like protein. (89 aa)

Your Current Organism:

Chaetomium thermophilum

NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTHT_0002960	CTHT_0030140	G0RZH3	G0S3P6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerases I, II, and III-like protein.	0.999
CTHT_0002960	CTHT_0030280	G0RZH3	G0S3Q8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SAP30_Sin3_bdg domain-containing protein.	0.999
CTHT_0002960	CTHT_0033930	G0RZH3	G0S625	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
CTHT_0002960	CTHT_0035920	G0RZH3	G0S727	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
CTHT_0002960	CTHT_0057070	G0RZH3	G0SCF9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I and III 40 kDa polypeptide-like protein.	0.999
CTHT_0002960	CTHT_0058280	G0RZH3	G0SCS7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerases I, II, and III-like protein.	0.999
CTHT_0030140	CTHT_0002960	G0S3P6	G0RZH3	RNA polymerases I, II, and III-like protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CTHT_0030140	CTHT_0030280	G0S3P6	G0S3Q8	RNA polymerases I, II, and III-like protein.	SAP30_Sin3_bdg domain-containing protein.	0.999
CTHT_0030140	CTHT_0033930	G0S3P6	G0S625	RNA polymerases I, II, and III-like protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
CTHT_0030140	CTHT_0035920	G0S3P6	G0S727	RNA polymerases I, II, and III-like protein.	Uncharacterized protein.	0.999
CTHT_0030140	CTHT_0057070	G0S3P6	G0SCF9	RNA polymerases I, II, and III-like protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide-like protein.	0.999
CTHT_0030140	CTHT_0058280	G0S3P6	G0SCS7	RNA polymerases I, II, and III-like protein.	RNA polymerases I, II, and III-like protein.	0.999
CTHT_0030280	CTHT_0002960	G0S3Q8	G0RZH3	SAP30_Sin3_bdg domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CTHT_0030280	CTHT_0030140	G0S3Q8	G0S3P6	SAP30_Sin3_bdg domain-containing protein.	RNA polymerases I, II, and III-like protein.	0.999
CTHT_0030280	CTHT_0033930	G0S3Q8	G0S625	SAP30_Sin3_bdg domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
CTHT_0030280	CTHT_0035920	G0S3Q8	G0S727	SAP30_Sin3_bdg domain-containing protein.	Uncharacterized protein.	0.999
CTHT_0030280	CTHT_0057070	G0S3Q8	G0SCF9	SAP30_Sin3_bdg domain-containing protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide-like protein.	0.999
CTHT_0030280	CTHT_0058280	G0S3Q8	G0SCS7	SAP30_Sin3_bdg domain-containing protein.	RNA polymerases I, II, and III-like protein.	0.999
CTHT_0033930	CTHT_0002960	G0S625	G0RZH3	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CTHT_0033930	CTHT_0030140	G0S625	G0S3P6	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	RNA polymerases I, II, and III-like protein.	0.999