11 items (Chaetomium thermophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTHT_0039140	Uncharacterized protein. (355 aa)
	CTHT_0022920	Uncharacterized protein. (353 aa)
	CTHT_0026600	G protein beta subunit-like protein. (359 aa)
	CTHT_0036570	Putative nucleotide-binding protein. (341 aa)
	CTHT_0040520	Putative very-long-chain protein. (893 aa)
	CTHT_0042820	Uncharacterized protein. (1135 aa)
	CTHT_0043170	Putative RNA polymerase II transcription factor. (1029 aa)
	CTHT_0047700	Putative very-long-chain protein. (642 aa)
	CTHT_0052810	Uncharacterized protein. (220 aa)
	CTHT_0053540	Arrestin_C domain-containing protein. (843 aa)
	CTHT_0069370	Guanine nucleotide-binding protein subunit-like protein. (194 aa)

Your Current Organism:

Chaetomium thermophilum

NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTHT_0022920	CTHT_0026600	G0S4I2	G0S6L1	Uncharacterized protein.	G protein beta subunit-like protein.	0.912
CTHT_0022920	CTHT_0039140	G0S4I2	G0S3W7	Uncharacterized protein.	Uncharacterized protein.	0.905
CTHT_0022920	CTHT_0069370	G0S4I2	G0SHB0	Uncharacterized protein.	Guanine nucleotide-binding protein subunit-like protein.	0.468
CTHT_0026600	CTHT_0022920	G0S6L1	G0S4I2	G protein beta subunit-like protein.	Uncharacterized protein.	0.912
CTHT_0026600	CTHT_0039140	G0S6L1	G0S3W7	G protein beta subunit-like protein.	Uncharacterized protein.	0.909
CTHT_0026600	CTHT_0069370	G0S6L1	G0SHB0	G protein beta subunit-like protein.	Guanine nucleotide-binding protein subunit-like protein.	0.994
CTHT_0039140	CTHT_0022920	G0S3W7	G0S4I2	Uncharacterized protein.	Uncharacterized protein.	0.905
CTHT_0039140	CTHT_0026600	G0S3W7	G0S6L1	Uncharacterized protein.	G protein beta subunit-like protein.	0.909
CTHT_0039140	CTHT_0069370	G0S3W7	G0SHB0	Uncharacterized protein.	Guanine nucleotide-binding protein subunit-like protein.	0.401
CTHT_0052810	CTHT_0053540	G0SDS4	G0SDZ4	Uncharacterized protein.	Arrestin_C domain-containing protein.	0.574
CTHT_0053540	CTHT_0052810	G0SDZ4	G0SDS4	Arrestin_C domain-containing protein.	Uncharacterized protein.	0.574
CTHT_0069370	CTHT_0022920	G0SHB0	G0S4I2	Guanine nucleotide-binding protein subunit-like protein.	Uncharacterized protein.	0.468
CTHT_0069370	CTHT_0026600	G0SHB0	G0S6L1	Guanine nucleotide-binding protein subunit-like protein.	G protein beta subunit-like protein.	0.994
CTHT_0069370	CTHT_0039140	G0SHB0	G0S3W7	Guanine nucleotide-binding protein subunit-like protein.	Uncharacterized protein.	0.401