(8 nodes) Mixed, incl. Pterin 4 alpha carbinolamine dehydratase, and L-lysine transport network (Colletotrichum higginsianum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CH063_16103	Uncharacterized protein. (95 aa)
	CH063_04884	Pterin 4 alpha carbinolamine dehydratase. (156 aa)
	CH063_05897	Uncharacterized protein. (360 aa)
	CH063_08037	Vacuolar membrane pq loop repeat protein. (324 aa)
	CH063_09358	Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)
	CH063_09371	Short-chain dehydrogenase. (248 aa)
	CH063_14336	Short-chain dehydrogenase. (69 aa)
	CH063_15440	Uncharacterized protein. (236 aa)

Your Current Organism:

Colletotrichum higginsianum

NCBI taxonomy Id: 759273
Other names: C. higginsianum IMI 349063, Colletotrichum higginsianum IMI 349063

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CH063_08037	CH063_09358	H1V8B7	H1VDA7	Vacuolar membrane pq loop repeat protein.	Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.408
CH063_08037	CH063_09371	H1V8B7	H1VDC7	Vacuolar membrane pq loop repeat protein.	Short-chain dehydrogenase.	0.408
CH063_09358	CH063_08037	H1VDA7	H1V8B7	Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Vacuolar membrane pq loop repeat protein.	0.408
CH063_09358	CH063_15440	H1VDA7	H1W2T5	Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.408
CH063_09371	CH063_08037	H1VDC7	H1V8B7	Short-chain dehydrogenase.	Vacuolar membrane pq loop repeat protein.	0.408
CH063_09371	CH063_15440	H1VDC7	H1W2T5	Short-chain dehydrogenase.	Uncharacterized protein.	0.408
CH063_15440	CH063_09358	H1W2T5	H1VDA7	Uncharacterized protein.	Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.408
CH063_15440	CH063_09371	H1W2T5	H1VDC7	Uncharacterized protein.	Short-chain dehydrogenase.	0.408