STRINGSTRING
CH063_04669 CH063_04669 CH063_00804 CH063_00804 CH063_05299 CH063_05299 CH063_00948 CH063_00948 CH063_05580 CH063_05580 CH063_05595 CH063_05595 CH063_01046 CH063_01046 CH063_01051 CH063_01051 CH063_06475 CH063_06475 CH063_06594 CH063_06594 CH063_01183 CH063_01183 CH063_06865 CH063_06865 CH063_07572 CH063_07572 CH063_07822 CH063_07822 CH063_07878 CH063_07878 CH063_07879 CH063_07879 CH063_07928 CH063_07928 CH063_08598 CH063_08598 CH063_08713 CH063_08713 CH063_08993 CH063_08993 CH063_09007 CH063_09007 CH063_00270 CH063_00270 CH063_00272 CH063_00272 CH063_09362 CH063_09362 CH063_09597 CH063_09597 CH063_09729 CH063_09729 CH063_10019 CH063_10019 CH063_10780 CH063_10780 CH063_11254 CH063_11254 CH063_02431 CH063_02431 CH063_11403 CH063_11403 CH063_02669 CH063_02669 CH063_11944 CH063_11944 CH063_02748 CH063_02748 CH063_13078 CH063_13078 CH063_03054 CH063_03054 CH063_13435 CH063_13435 CH063_03188 CH063_03188 CH063_13957 CH063_13957 CH063_14030 CH063_14030 CH063_14055 CH063_14055 CH063_14079 CH063_14079 CH063_14080 CH063_14080 CH063_03435 CH063_03435 CH063_14274 CH063_14274 CH063_14635 CH063_14635 CH063_15094 CH063_15094 CH063_15138 CH063_15138 CH063_15215 CH063_15215 CH063_03911 CH063_03911 CH063_15516 CH063_15516 CH063_15573 CH063_15573 CH063_00688 CH063_00688 CH063_04245 CH063_04245 CH063_16065 CH063_16065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CH063_04669DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (918 aa)
CH063_00804ThiF family protein. (702 aa)
CH063_05299Ubiquitin-like domain-containing protein. (206 aa)
CH063_00948HECT-domain-containing protein. (1173 aa)
CH063_05580MIZ/SP-RING zinc finger. (510 aa)
CH063_05595Ubiquitin-conjugating enzyme. (191 aa)
CH063_01046Ubiquitin family protein. (100 aa)
CH063_01051HECT-domain-containing protein. (1886 aa)
CH063_06475NmrA domain-containing protein. (318 aa)
CH063_06594Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
CH063_01183Zz type zinc finger domain-containing protein. (857 aa)
CH063_06865Ubiquitin thiolesterase. (215 aa)
CH063_07572Polymerase. (1182 aa)
CH063_07822Polyubiquitin. (101 aa)
CH063_07878Ubiquitin elongating factor core. (792 aa)
CH063_07879TRAF-type domain-containing protein. (299 aa)
CH063_07928Uncharacterized protein. (172 aa)
CH063_08598Ef hand domain-containing protein. (937 aa)
CH063_08713Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
CH063_08993Ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
CH063_09007Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (236 aa)
CH063_00270Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
CH063_00272Ubiquitin carrier protein. (364 aa)
CH063_09362ThiF family protein. (513 aa)
CH063_09597Ubiquitin-protein ligase E3A. (369 aa)
CH063_09729Ubiquitin-conjugating enzyme. (444 aa)
CH063_10019Uncharacterized protein. (807 aa)
CH063_10780U-box domain-containing protein. (270 aa)
CH063_11254Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
CH063_02431Y73F8A.34b. (72 aa)
CH063_11403Ubiquitin-conjugating enzyme. (58 aa)
CH063_02669HECT-domain-containing protein. (1184 aa)
CH063_11944Ubiquitin-conjugating enzyme family protein. (632 aa)
CH063_02748Ubiquitin-conjugating enzyme. (140 aa)
CH063_13078Ubiquitin-conjugating enzyme. (167 aa)
CH063_03054E3 ubiquitin protein ligase. (706 aa)
CH063_13435SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
CH063_03188DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1728 aa)
CH063_13957Ubiquitin-activating enzyme E1. (360 aa)
CH063_14030Deubiquitination-protection protein dph1. (344 aa)
CH063_14055Integral membrane protein. (523 aa)
CH063_14079Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
CH063_14080UBA domain-containing protein. (94 aa)
CH063_03435Ubiquitin-conjugating enzyme. (265 aa)
CH063_14274Uncharacterized protein. (380 aa)
CH063_14635Ubiquitin-protein ligase E3A. (516 aa)
CH063_15094Ubiquitin conjugation factor E4. (230 aa)
CH063_15138RING-type domain-containing protein. (172 aa)
CH063_15215Ubiquitin-like domain-containing protein. (83 aa)
CH063_03911Ubiquitin-conjugating enzyme. (333 aa)
CH063_15516Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (225 aa)
CH063_15573Uncharacterized protein. (82 aa)
CH063_00688Thioredoxin. (181 aa)
CH063_04245Ubiquitin-conjugating enzyme. (155 aa)
CH063_16065Dsk2p is a nuclear-enriched protein. (256 aa)
Your Current Organism:
Colletotrichum higginsianum
NCBI taxonomy Id: 759273
Other names: C. higginsianum IMI 349063, Colletotrichum higginsianum IMI 349063
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