50 items (Colletotrichum higginsianum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CH063_04730	Uncharacterized protein. (233 aa)
	CH063_05049	WD domain containing protein. (1161 aa)
	CH063_05124	Uncharacterized protein. (835 aa)
	CH063_05232	Upf0052 domain containing protein. (723 aa)
	CH063_01030	Pathway-specific nitrogen regulator. (1039 aa)
	CH063_00169	PHD domain-containing protein. (712 aa)
	CH063_06681	Uncharacterized protein. (568 aa)
	CH063_07079	Uncharacterized protein. (315 aa)
	CH063_01281	Uncharacterized protein. (613 aa)
	CH063_07343	Uncharacterized protein. (232 aa)
	CH063_07676	Involucrin repeat protein. (905 aa)
	CH063_07735	Uncharacterized protein. (304 aa)
	CH063_07771	Uncharacterized protein. (247 aa)
	CH063_07825	Glucan 4-alpha-glucosidase. (758 aa)
	CH063_07923	BZIP transcription. (160 aa)
	CH063_07960	Uncharacterized protein. (185 aa)
	CH063_08752	Uncharacterized protein. (660 aa)
	CH063_09002	C2H2-type domain-containing protein. (593 aa)
	CH063_09599	Uncharacterized protein. (754 aa)
	CH063_09746	Uncharacterized protein. (673 aa)
	CH063_10079	GAS2 domain-containing protein. (926 aa)
	CH063_10084	Pre-mRNA splicing factor CLF1. (777 aa)
	CH063_02238	Uncharacterized protein. (624 aa)
	CH063_10759	Uncharacterized protein. (1065 aa)
	CH063_11059	CRIB domain-containing protein. (636 aa)
	CH063_11784	Uncharacterized protein. (832 aa)
	CH063_12000	Uncharacterized protein. (648 aa)
	CH063_12223	SRm160/300 splicing coactivator. (813 aa)
	CH063_02836	SIP5 protein. (878 aa)
	CH063_12497	Uncharacterized protein. (245 aa)
	CH063_02946	Uncharacterized protein. (794 aa)
	CH063_12869	GATA transcription factor. (937 aa)
	CH063_02985	Ubiquitin family protein. (726 aa)
	CH063_12916	Uncharacterized protein. (203 aa)
	CH063_03012	SH3 domain-containing protein. (798 aa)
	CH063_12978	Uncharacterized protein. (443 aa)
	CH063_13311	Uncharacterized protein. (188 aa)
	CH063_13619	Uncharacterized protein. (300 aa)
	CH063_13761	Uncharacterized protein. (119 aa)
	CH063_13886	Uncharacterized protein. (341 aa)
	CH063_14231	Uncharacterized protein. (656 aa)
	CH063_14298	Uncharacterized protein. (512 aa)
	CH063_03538	Shugoshin. (735 aa)
	CH063_14476	Uncharacterized protein. (565 aa)
	CH063_14475	Uncharacterized protein. (349 aa)
	CH063_14496	Uncharacterized protein. (166 aa)
	CH063_15047	Uncharacterized protein. (198 aa)
	CH063_00080	Uncharacterized protein. (1032 aa)
	CH063_15564	Uncharacterized protein. (354 aa)
	CH063_00673	Uncharacterized protein. (1251 aa)

Your Current Organism:

Colletotrichum higginsianum

NCBI taxonomy Id: 759273
Other names: C. higginsianum IMI 349063, Colletotrichum higginsianum IMI 349063

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CH063_00080	CH063_07825	H1W2Z0	H1V7K2	Uncharacterized protein.	Glucan 4-alpha-glucosidase.	0.454
CH063_00080	CH063_10079	H1W2Z0	H1VG34	Uncharacterized protein.	GAS2 domain-containing protein.	0.556
CH063_00080	CH063_11059	H1W2Z0	H1VJW3	Uncharacterized protein.	CRIB domain-containing protein.	0.404
CH063_00080	CH063_12223	H1W2Z0	H1VPJ3	Uncharacterized protein.	SRm160/300 splicing coactivator.	0.472
CH063_00080	CH063_12916	H1W2Z0	H1VSB3	Uncharacterized protein.	Uncharacterized protein.	0.442
CH063_00080	CH063_13311	H1W2Z0	H1VTW7	Uncharacterized protein.	Uncharacterized protein.	0.419
CH063_00080	CH063_13761	H1W2Z0	H1VVR0	Uncharacterized protein.	Uncharacterized protein.	0.494
CH063_00080	CH063_13886	H1W2Z0	H1VWA0	Uncharacterized protein.	Uncharacterized protein.	0.423
CH063_00169	CH063_03012	H1V2E1	H1VSF6	PHD domain-containing protein.	SH3 domain-containing protein.	0.426
CH063_00673	CH063_07825	H1W4J0	H1V7K2	Uncharacterized protein.	Glucan 4-alpha-glucosidase.	0.414
CH063_00673	CH063_10079	H1W4J0	H1VG34	Uncharacterized protein.	GAS2 domain-containing protein.	0.445
CH063_00673	CH063_11059	H1W4J0	H1VJW3	Uncharacterized protein.	CRIB domain-containing protein.	0.404
CH063_01030	CH063_12223	H1V0M3	H1VPJ3	Pathway-specific nitrogen regulator.	SRm160/300 splicing coactivator.	0.438
CH063_01030	CH063_14298	H1V0M3	H1VY02	Pathway-specific nitrogen regulator.	Uncharacterized protein.	0.508
CH063_02238	CH063_03012	H1VI97	H1VSF6	Uncharacterized protein.	SH3 domain-containing protein.	0.493
CH063_02238	CH063_04730	H1VI97	H1UWG8	Uncharacterized protein.	Uncharacterized protein.	0.430
CH063_02238	CH063_07343	H1VI97	H1V5U7	Uncharacterized protein.	Uncharacterized protein.	0.409
CH063_02238	CH063_11059	H1VI97	H1VJW3	Uncharacterized protein.	CRIB domain-containing protein.	0.475
CH063_02238	CH063_12223	H1VI97	H1VPJ3	Uncharacterized protein.	SRm160/300 splicing coactivator.	0.921
CH063_02238	CH063_13761	H1VI97	H1VVR0	Uncharacterized protein.	Uncharacterized protein.	0.421