STRINGSTRING
bamD bamD AEA34247.1 AEA34247.1 lolD lolD AEA34249.1 AEA34249.1 AEA34250.1 AEA34250.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
bamDOuter membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (251 aa)
AEA34247.1Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ddf:DEFDS_0471 lipoprotein-releasing system permease protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family. (396 aa)
lolDPhosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (224 aa)
AEA34249.1COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827; IPR000184; IPR016474; KEGG: ddf:DEFDS_0104 hypothetical protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative uncharacterized protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein. (746 aa)
AEA34250.1InterPro IPR005632; KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like). (172 aa)
Your Current Organism:
Hippea maritima
NCBI taxonomy Id: 760142
Other names: H. maritima DSM 10411, Hippea maritima DSM 10411, Hippea maritima MS2, Hippea maritima MS[subscript]2, Hippea maritima str. DSM 10411, Hippea maritima strain DSM 10411
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