Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| accC | ferA | ebA1474 | ebA5611 | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | 0.650 |
| accC | ferA-2 | ebA1474 | ebA5667 | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | 0.650 |
| accC | sucC | ebA1474 | ebA1272 | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Succinyl-CoA synthetase, beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.853 |
| accC | xccC | ebA1474 | ebA316 | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme. | 0.922 |
| accC | xccC-2 | ebA1474 | ebA5774 | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxylase subunit of unknown acetyl-CoA carboxylase-like enzyme. | 0.924 |
| carB | purD | ebA4815 | ebA1155 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Phosphoribosylamine-glycine ligase; Belongs to the GARS family. | 0.656 |
| ebA4278 | ebA4298 | ebA4278 | ebA4298 | Hypothetical protein. | Conserved hypothetical protein. | 0.420 |
| ebA4298 | ebA4278 | ebA4298 | ebA4278 | Conserved hypothetical protein. | Hypothetical protein. | 0.420 |
| ebA5272 | yfiQ | ebA5272 | ebA6829 | Putative acetyltransferase. | Acyl-CoA synthetase (ADP forming). | 0.551 |
| ferA | accC | ebA5611 | ebA1474 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.650 |
| ferA | ferA-2 | ebA5611 | ebA5667 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | 0.902 |
| ferA | pccA | ebA5611 | ebA3743 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Propionyl-CoA carboxylase, alpha subunit. | 0.900 |
| ferA | sucC | ebA5611 | ebA1272 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Succinyl-CoA synthetase, beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.808 |
| ferA | xccC | ebA5611 | ebA316 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme. | 0.650 |
| ferA | xccC-2 | ebA5611 | ebA5774 | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | Biotin carboxylase subunit of unknown acetyl-CoA carboxylase-like enzyme. | 0.650 |
| ferA-2 | accC | ebA5667 | ebA1474 | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | Putative biotin carboxylase protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.650 |
| ferA-2 | ferA | ebA5667 | ebA5611 | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase. | 0.902 |
| ferA-2 | pccA | ebA5667 | ebA3743 | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | Propionyl-CoA carboxylase, alpha subunit. | 0.900 |
| ferA-2 | sucC | ebA5667 | ebA1272 | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | Succinyl-CoA synthetase, beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.808 |
| ferA-2 | xccC | ebA5667 | ebA316 | Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase. | Biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme. | 0.650 |
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