STRINGSTRING
ddl ddl rsmH rsmH ALO47759.1 ALO47759.1 ALO47760.1 ALO47760.1 murE murE mraY mraY murD murD ALO47764.1 ALO47764.1 ftsZ ftsZ ftsA ftsA ALO47771.1 ALO47771.1 ALO47772.1 ALO47772.1 murG murG rlpA rlpA ALO47959.1 ALO47959.1 ALO47960.1 ALO47960.1 ALO49789.1 ALO49789.1 ALO47961.1 ALO47961.1 ALO47962.1 ALO47962.1 murB murB ALO48507.1 ALO48507.1 ALO48508.1 ALO48508.1 ALO49868.1 ALO49868.1 ALO48770.1 ALO48770.1 ALO48822.1 ALO48822.1 ALO49199.1 ALO49199.1 ALO49200.1 ALO49200.1 ALO49348.1 ALO49348.1 murF murF ALO49452.1 ALO49452.1 murA murA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (334 aa)
rsmHRibosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (304 aa)
ALO47759.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
ALO47760.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (720 aa)
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (484 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (422 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (443 aa)
ALO47764.1Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. (420 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (443 aa)
ftsACell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (475 aa)
ALO47771.1Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
ALO47772.1UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (458 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (366 aa)
rlpAHypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (209 aa)
ALO47959.1Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
ALO47960.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (285 aa)
ALO49789.1Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
ALO47961.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (616 aa)
ALO47962.1Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. (489 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (338 aa)
ALO48507.1Mannose-1-phosphate guanyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
ALO48508.1Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
ALO49868.1Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (829 aa)
ALO48770.1N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ALO48822.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
ALO49199.1Polyphenol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family. (259 aa)
ALO49200.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
ALO49348.1UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (824 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (441 aa)
ALO49452.1Sugar tyrosine-protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (436 aa)
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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