(8 nodes) Glycosyl hydrolase, family 13, catalytic domain, and Starch and sucrose metabolism network (Prevotella enoeca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALO47847.1	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)
	ALO47848.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)
	ALO48542.1	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
	ALO48673.1	1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)
	ALO48848.1	Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (853 aa)
	ALO49593.1	4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (900 aa)
	ALO49594.1	Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (641 aa)
	ALO49595.1	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (620 aa)

Your Current Organism:

Prevotella enoeca

NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALO47847.1	ALO47848.1	AS203_00960	AS203_00965	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ALO47847.1	ALO48542.1	AS203_00960	AS203_05160	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
ALO47847.1	ALO48673.1	AS203_00960	AS203_05940	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
ALO47847.1	ALO48848.1	AS203_00960	AS203_06950	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
ALO47847.1	ALO49593.1	AS203_00960	AS203_11275	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
ALO47847.1	ALO49594.1	AS203_00960	AS203_11280	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.954
ALO47847.1	ALO49595.1	AS203_00960	AS203_11285	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.494
ALO47848.1	ALO47847.1	AS203_00965	AS203_00960	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ALO47848.1	ALO48673.1	AS203_00965	AS203_05940	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
ALO47848.1	ALO48848.1	AS203_00965	AS203_06950	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ALO47848.1	ALO49593.1	AS203_00965	AS203_11275	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
ALO47848.1	ALO49594.1	AS203_00965	AS203_11280	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.938
ALO47848.1	ALO49595.1	AS203_00965	AS203_11285	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.818
ALO48542.1	ALO47847.1	AS203_05160	AS203_00960	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
ALO48542.1	ALO48673.1	AS203_05160	AS203_05940	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
ALO48542.1	ALO48848.1	AS203_05160	AS203_06950	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ALO48542.1	ALO49593.1	AS203_05160	AS203_11275	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ALO48542.1	ALO49594.1	AS203_05160	AS203_11280	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.849
ALO48542.1	ALO49595.1	AS203_05160	AS203_11285	Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.	0.534
ALO48673.1	ALO47847.1	AS203_05940	AS203_00960	1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937