STRINGSTRING
priA priA ALO49508.1 ALO49508.1 ALO49511.1 ALO49511.1 ALO49539.1 ALO49539.1 ALO49544.1 ALO49544.1 ALO49567.1 ALO49567.1 metG metG gltX gltX pnp pnp ALO47710.1 ALO47710.1 rnr rnr rbfA rbfA cysS cysS nusA nusA rnhB rnhB ALO47755.1 ALO47755.1 rsmH rsmH ALO47783.1 ALO47783.1 ALO47791.1 ALO47791.1 ALO49605.1 ALO49605.1 ALO47797.1 ALO47797.1 ALO47802.1 ALO47802.1 rpoC rpoC rpoB rpoB nusG nusG ALO47830.1 ALO47830.1 ALO47852.1 ALO47852.1 ALO49768.1 ALO49768.1 rpoA rpoA tadA tadA rsmI rsmI argS argS tyrS tyrS rnpA rnpA ybeY ybeY ALO49711.1 ALO49711.1 mnmG mnmG ALO49697.1 ALO49697.1 leuS leuS miaB miaB ALO47938.1 ALO47938.1 ALO47965.1 ALO47965.1 ALO47979.1 ALO47979.1 ALO49793.1 ALO49793.1 ALO48027.1 ALO48027.1 ALO48042.1 ALO48042.1 ALO48047.1 ALO48047.1 mnmE mnmE miaA miaA ALO48084.1 ALO48084.1 ALO48093.1 ALO48093.1 tsaD tsaD pheS pheS hisS hisS ALO48136.1 ALO48136.1 rny rny ALO48147.1 ALO48147.1 ALO48154.1 ALO48154.1 ALO48175.1 ALO48175.1 ALO48204.1 ALO48204.1 proS proS ALO48222.1 ALO48222.1 ALO48241.1 ALO48241.1 ALO48288.1 ALO48288.1 ALO49839.1 ALO49839.1 ALO48306.1 ALO48306.1 cas2 cas2 ALO48321.1 ALO48321.1 ALO49841.1 ALO49841.1 trmB trmB ALO48339.1 ALO48339.1 ALO48346.1 ALO48346.1 tilS tilS rsmA rsmA ALO49852.1 ALO49852.1 aspS aspS ALO48457.1 ALO48457.1 ALO48458.1 ALO48458.1 ALO48462.1 ALO48462.1 AS203_04905 AS203_04905 ALO49861.1 ALO49861.1 ALO48540.1 ALO48540.1 ALO48545.1 ALO48545.1 miaA-2 miaA-2 ALO48566.1 ALO48566.1 rimO rimO ALO48688.1 ALO48688.1 dnaG dnaG ALO48706.1 ALO48706.1 ALO48717.1 ALO48717.1 ALO48738.1 ALO48738.1 ALO48746.1 ALO48746.1 ALO48750.1 ALO48750.1 fmt fmt alaS alaS ALO49900.1 ALO49900.1 ALO48778.1 ALO48778.1 lysS lysS ALO48788.1 ALO48788.1 ALO48794.1 ALO48794.1 ALO48799.1 ALO48799.1 rsmG rsmG pheT pheT truA truA ALO48906.1 ALO48906.1 ALO48939.1 ALO48939.1 ALO48944.1 ALO48944.1 ALO48945.1 ALO48945.1 ALO48949.1 ALO48949.1 rlmN rlmN ALO48992.1 ALO48992.1 valS valS rnz rnz rlmH rlmH ALO49023.1 ALO49023.1 ileS ileS ALO49033.1 ALO49033.1 tgt tgt ALO49054.1 ALO49054.1 ALO49055.1 ALO49055.1 ALO49066.1 ALO49066.1 ALO49132.1 ALO49132.1 ALO49160.1 ALO49160.1 ALO49169.1 ALO49169.1 trmD trmD thrS thrS ALO49223.1 ALO49223.1 ALO49229.1 ALO49229.1 ALO49241.1 ALO49241.1 ALO49250.1 ALO49250.1 truB truB ALO49951.1 ALO49951.1 ALO49267.1 ALO49267.1 ALO49305.1 ALO49305.1 ALO49312.1 ALO49312.1 ALO49316.1 ALO49316.1 rho rho glyQS glyQS ALO49364.1 ALO49364.1 asnS asnS ALO49375.1 ALO49375.1 ALO49422.1 ALO49422.1 rnc rnc ALO49430.1 ALO49430.1 ALO49467.1 ALO49467.1 rimM rimM ALO49483.1 ALO49483.1 ALO49484.1 ALO49484.1 ALO49487.1 ALO49487.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (756 aa)
ALO49508.1RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
ALO49511.1tRNA-specific 2-thiouridylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
ALO49539.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
ALO49544.1RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
ALO49567.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
metGmethionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (681 aa)
gltXglutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (505 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (796 aa)
ALO47710.1TIM-barrel enzyme; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (326 aa)
rnrRibonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (731 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (111 aa)
cysScysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (496 aa)
nusATranscription elongation factor NusA; Participates in both transcription termination and antitermination. (421 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (200 aa)
ALO47755.1RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (354 aa)
rsmHRibosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (304 aa)
ALO47783.1RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (290 aa)
ALO47791.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
ALO49605.1Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (153 aa)
ALO47797.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (564 aa)
ALO47802.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1445 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
nusGAntitermination protein NusG; Participates in transcription elongation, termination and antitermination. (180 aa)
ALO47830.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALO47852.116S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
ALO49768.1Guanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa)
tadACMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (148 aa)
rsmI16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (230 aa)
argSarginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
tyrStyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (433 aa)
rnpARibonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (138 aa)
ybeYrRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (143 aa)
ALO49711.1DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
mnmGtRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (623 aa)
ALO49697.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
leuSleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (960 aa)
miaBtRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (437 aa)
ALO47938.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
ALO47965.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALO47979.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
ALO49793.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
ALO48027.1Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (140 aa)
ALO48042.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALO48047.1RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (287 aa)
mnmEtRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (450 aa)
miaAtRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (307 aa)
ALO48084.1RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ALO48093.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
tsaDtRNA threonylcarbamoyl adenosine modification protein TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (341 aa)
pheSphenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (345 aa)
hisShistidyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
ALO48136.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
rnyRibonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (512 aa)
ALO48147.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
ALO48154.1DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. (495 aa)
ALO48175.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
ALO48204.1NYN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
proSproline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (493 aa)
ALO48222.1Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (341 aa)
ALO48241.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
ALO48288.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
ALO49839.1UpdY protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
ALO48306.1RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (198 aa)
cas2CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (87 aa)
ALO48321.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
ALO49841.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
trmBtRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (255 aa)
ALO48339.1tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
ALO48346.1RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (494 aa)
tilStRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (430 aa)
rsmA16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (266 aa)
ALO49852.1Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
aspSaspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (588 aa)
ALO48457.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
ALO48458.1RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (180 aa)
ALO48462.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AS203_04905Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
ALO49861.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
ALO48540.1SigL protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (159 aa)
ALO48545.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
miaA-2tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (299 aa)
ALO48566.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
rimORibosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (431 aa)
ALO48688.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (660 aa)
ALO48706.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALO48717.1Epoxyqueuosine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
ALO48738.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
ALO48746.1tryptophan--tRNA ligase; Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (362 aa)
ALO48750.1Translation factor Sua5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family. (189 aa)
fmtmethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (324 aa)
alaSalanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (873 aa)
ALO49900.1RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (290 aa)
ALO48778.1serine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
lysSlysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. (578 aa)
ALO48788.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (503 aa)
ALO48794.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
ALO48799.1glutaminyl-tRNA synthetase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
rsmG16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (206 aa)
pheTphenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (820 aa)
truAPseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (243 aa)
ALO48906.1NYN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
ALO48939.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)
ALO48944.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
ALO48945.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
ALO48949.1Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
rlmN23S rRNA (adenine(2503)-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (341 aa)
ALO48992.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
valSvaline--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (878 aa)
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (305 aa)
rlmH50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (156 aa)
ALO49023.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
ileSisoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1186 aa)
ALO49033.116S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (240 aa)
tgtQueuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] (375 aa)
ALO49054.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
ALO49055.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
ALO49066.1Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
ALO49132.1Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). (241 aa)
ALO49160.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (167 aa)
ALO49169.1Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (224 aa)
thrSthreonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (654 aa)
ALO49223.1tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
ALO49229.1RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
ALO49241.1RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (297 aa)
ALO49250.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
truBPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (233 aa)
ALO49951.1tRNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (477 aa)
ALO49267.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
ALO49305.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
ALO49312.1RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
ALO49316.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (664 aa)
glyQSglycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (514 aa)
ALO49364.1Toxin PIN; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
asnSAsparaginyl- tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
ALO49375.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (485 aa)
ALO49422.1RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
rncRibonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (339 aa)
ALO49430.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALO49467.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (177 aa)
ALO49483.1tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
ALO49484.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
ALO49487.1Toxin PIN; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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