STRINGSTRING
RR48_01512 RR48_01512 RR48_06491 RR48_06491 RR48_06098 RR48_06098 RR48_10635 RR48_10635 RR48_06534 RR48_06534 RR48_06492 RR48_06492 RR48_11087 RR48_11087 RR48_11086 RR48_11086 RR48_12395 RR48_12395 RR48_10639 RR48_10639 RR48_10626 RR48_10626 RR48_13912 RR48_13912 RR48_12394 RR48_12394 RR48_12042 RR48_12042 RR48_10310 RR48_10310 RR48_11987 RR48_11987 RR48_07312 RR48_07312 RR48_07301 RR48_07301 RR48_11986 RR48_11986 RR48_13911 RR48_13911 RR48_14000 RR48_14000 RR48_13910 RR48_13910 RR48_13870 RR48_13870 RR48_13695 RR48_13695 RR48_10314 RR48_10314 RR48_10318 RR48_10318 RR48_09218 RR48_09218 RR48_08098 RR48_08098 RR48_13597 RR48_13597 RR48_09985 RR48_09985 RR48_09656 RR48_09656 RR48_09065 RR48_09065 RR48_13530 RR48_13530 RR48_13598 RR48_13598 RR48_13629 RR48_13629 RR48_13519 RR48_13519 RR48_11542 RR48_11542 RR48_06998 RR48_06998 RR48_09853 RR48_09853 RR48_08047 RR48_08047 RR48_15055 RR48_15055 RR48_10532 RR48_10532 RR48_11541 RR48_11541 RR48_11674 RR48_11674 RR48_08046 RR48_08046 RR48_06388 RR48_06388 RR48_15054 RR48_15054 RR48_14783 RR48_14783 RR48_15317 RR48_15317 RR48_15147 RR48_15147 RR48_07799 RR48_07799 RR48_13333 RR48_13333 RR48_08825 RR48_08825 RR48_08499 RR48_08499 RR48_08474 RR48_08474 RR48_06197 RR48_06197 RR48_11420 RR48_11420 RR48_07837 RR48_07837 RR48_12812 RR48_12812 RR48_13033 RR48_13033 RR48_12652 RR48_12652 RR48_11221 RR48_11221 RR48_11265 RR48_11265 RR48_08477 RR48_08477 RR48_11419 RR48_11419 RR48_07660 RR48_07660 RR48_07598 RR48_07598 RR48_07594 RR48_07594 RR48_14319 RR48_14319 RR48_14211 RR48_14211 RR48_03242 RR48_03242 RR48_03243 RR48_03243 RR48_02923 RR48_02923 RR48_05720 RR48_05720 RR48_04298 RR48_04298 RR48_04429 RR48_04429 RR48_03719 RR48_03719 RR48_05864 RR48_05864 RR48_02265 RR48_02265 RR48_00994 RR48_00994 RR48_01874 RR48_01874 RR48_01578 RR48_01578 RR48_02415 RR48_02415 RR48_00701 RR48_00701 RR48_00048 RR48_00048 RR48_00436 RR48_00436 RR48_05736 RR48_05736 RR48_04351 RR48_04351 RR48_04380 RR48_04380 RR48_01970 RR48_01970 RR48_00323 RR48_00323 RR48_03880 RR48_03880 RR48_02200 RR48_02200 RR48_00068 RR48_00068 RR48_04296 RR48_04296 RR48_00578 RR48_00578 RR48_05248 RR48_05248 RR48_04433 RR48_04433 RR48_04355 RR48_04355 RR48_05397 RR48_05397 RR48_02351 RR48_02351 RR48_02364 RR48_02364 RR48_05265 RR48_05265 RR48_02344 RR48_02344 RR48_02419 RR48_02419 RR48_03333 RR48_03333 RR48_04352 RR48_04352 RR48_05264 RR48_05264 RR48_01145 RR48_01145 RR48_00012 RR48_00012 RR48_00661 RR48_00661 RR48_00428 RR48_00428 RR48_03357 RR48_03357 RR48_04293 RR48_04293 RR48_03915 RR48_03915 RR48_04056 RR48_04056 RR48_01684 RR48_01684 RR48_00922 RR48_00922 RR48_02022 RR48_02022 RR48_00619 RR48_00619 RR48_03505 RR48_03505 RR48_01574 RR48_01574 RR48_04893 RR48_04893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RR48_01512Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (273 aa)
RR48_06491Dosage compensation regulator. (680 aa)
RR48_06098ATP-dependent RNA helicase WM6. (425 aa)
RR48_10635Pre-mRNA-processing factor 6. (929 aa)
RR48_06534RNA-binding protein 26. (940 aa)
RR48_06492Dosage compensation regulator. (645 aa)
RR48_11087Protein held out wings. (300 aa)
RR48_11086Protein held out wings. (92 aa)
RR48_12395Poly(RC)-binding protein 3. (287 aa)
RR48_10639Uncharacterized protein. (228 aa)
RR48_10626Putative ATP-dependent RNA helicase DDX46. (1016 aa)
RR48_13912Uncharacterized protein. (141 aa)
RR48_12394Poly(RC)-binding protein 4. (165 aa)
RR48_12042Pre-mRNA-processing factor 39. (947 aa)
RR48_10310Splicing factor 45. (397 aa)
RR48_11987Helicase SKI2W. (859 aa)
RR48_07312Activating signal cointegrator 1 complex subunit 3. (2040 aa)
RR48_07301Serine/arginine-rich splicing factor 4. (402 aa)
RR48_11986Helicase SKI2W. (382 aa)
RR48_13911RNA-binding protein Nova-2. (144 aa)
RR48_14000Protein SON. (663 aa)
RR48_13910RNA-binding protein Nova-1. (441 aa)
RR48_13870Protein RRP5-like. (1381 aa)
RR48_13695Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (658 aa)
RR48_10314Survival of motor neuron-related-splicing factor 30. (239 aa)
RR48_10318Uncharacterized protein. (131 aa)
RR48_09218RNA-binding protein 39. (525 aa)
RR48_08098Pre-mRNA-splicing factor RBM22. (395 aa)
RR48_13597Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like. (243 aa)
RR48_09985E3 ubiquitin-protein ligase Hakai. (320 aa)
RR48_09656RNA-binding protein Rsf1. (158 aa)
RR48_09065RNA binding protein fox-1-like 3. (426 aa)
RR48_13530RNA-binding protein MEX3B. (300 aa)
RR48_13598Heterogeneous nuclear ribonucleoprotein A1. (319 aa)
RR48_13629RNA-binding protein 1. (160 aa)
RR48_13519Heterogeneous nuclear ribonucleoprotein 27C. (512 aa)
RR48_11542Pre-mRNA-splicing factor SYF1. (843 aa)
RR48_06998Fragile X mental retardation syndrome-related protein 1-like A. (584 aa)
RR48_09853Putative ATP-dependent RNA helicase DDX17. (973 aa)
RR48_08047Protein muscleblind. (109 aa)
RR48_15055Serine/arginine repetitive matrix protein 1. (123 aa)
RR48_10532Serine/threonine-protein kinase Doa. (884 aa)
RR48_11541Zinc finger CCCH domain-containing protein 13. (1024 aa)
RR48_11674Putative ATP-dependent RNA helicase DDX46. (87 aa)
RR48_08046Muscleblind-like protein 2. (453 aa)
RR48_06388Splicing factor U2af 38 kDa subunit. (227 aa)
RR48_15054Serine/arginine repetitive matrix protein 1. (803 aa)
RR48_14783ELAV-like protein 2. (301 aa)
RR48_15317Zinc finger CCCH domain-containing protein 10. (695 aa)
RR48_15147Zinc finger CCCH domain-containing protein 10. (587 aa)
RR48_07799SAFB-like transcription modulator. (607 aa)
RR48_13333Pentatricopeptide repeat-containing protein 2. (315 aa)
RR48_08825RNA-binding protein 24-B. (325 aa)
RR48_08499U2 small nuclear ribonucleoprotein B. (199 aa)
RR48_08474Helicase ATP-binding domain-containing protein. (743 aa)
RR48_06197PHD finger protein 3. (1794 aa)
RR48_11420CUGBP Elav-like family member 2. (319 aa)
RR48_07837Zinc finger CCCH domain-containing protein 10. (524 aa)
RR48_12812ATP-dependent RNA helicase DHX8. (1163 aa)
RR48_13033Serine/arginine-rich splicing factor 2. (163 aa)
RR48_12652Methyltransferase-like protein 14; Belongs to the MT-A70-like family. (313 aa)
RR48_11221Far upstream element-binding protein 1. (727 aa)
RR48_11265Putative N6-adenosine-methyltransferase MT-A70-like protein; Belongs to the MT-A70-like family. (406 aa)
RR48_08477Helicase C-terminal domain-containing protein. (531 aa)
RR48_11419CUGBP Elav-like family member 5. (343 aa)
RR48_07660Serine/threonine-protein kinase SRPK1. (604 aa)
RR48_07598YTH domain-containing protein 1. (441 aa)
RR48_07594Zinc finger CCCH domain-containing protein 3. (424 aa)
RR48_14319Protein crooked neck. (696 aa)
RR48_14211Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. (374 aa)
RR48_03242Putative ATP-dependent RNA helicase Dbp45A. (127 aa)
RR48_03243Putative ATP-dependent RNA helicase Dbp45A; Belongs to the DEAD box helicase family. (473 aa)
RR48_02923KH domain-containing, RNA-binding, signal transduction-associated protein 2. (368 aa)
RR48_05720Nucleolysin TIA-1 isoform p40. (589 aa)
RR48_04298Protein elav. (359 aa)
RR48_04429RNA-binding protein 7. (206 aa)
RR48_03719RNA-binding protein 25. (949 aa)
RR48_05864Cleavage and polyadenylation specificity factor subunit 7. (580 aa)
RR48_02265U1 small nuclear ribonucleoprotein 70 kDa. (314 aa)
RR48_00994Pre-mRNA-processing factor 6. (554 aa)
RR48_01874Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (620 aa)
RR48_01578Nucleolysin TIA-1 isoform p40. (368 aa)
RR48_02415Splicing factor 1. (697 aa)
RR48_00701CUGBP Elav-like family member 6. (42 aa)
RR48_00048U5 small nuclear ribonucleoprotein 200 kDa helicase. (76 aa)
RR48_00436Dosage compensation regulator. (135 aa)
RR48_05736PHD and RING finger domain-containing protein 1. (2034 aa)
RR48_04351Heterogeneous nuclear ribonucleoprotein K. (252 aa)
RR48_04380Putative RNA-binding protein 15B. (750 aa)
RR48_01970Zinc finger protein on ecdysone puffs. (560 aa)
RR48_00323Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (139 aa)
RR48_03880Zinc finger CCCH domain-containing protein 14. (1005 aa)
RR48_02200Helicase domino. (1512 aa)
RR48_00068Uncharacterized protein. (115 aa)
RR48_04296CUGBP Elav-like family member 3. (173 aa)
RR48_00578Helicase C-terminal domain-containing protein. (104 aa)
RR48_05248Splicing factor 3A subunit 1. (558 aa)
RR48_04433La-related protein 7. (534 aa)
RR48_04355Putative splicing factor, arginine/serine-rich 7. (631 aa)
RR48_05397RNA-binding protein 12. (986 aa)
RR48_02351Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (845 aa)
RR48_02364Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (155 aa)
RR48_05265ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (545 aa)
RR48_02344Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (690 aa)
RR48_02419RNA-binding protein squid. (286 aa)
RR48_03333Protein virilizer. (1975 aa)
RR48_04352Heterogeneous nuclear ribonucleoprotein K. (277 aa)
RR48_05264ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (520 aa)
RR48_01145Poly(U)-binding-splicing factor half pint. (1124 aa)
RR48_00012Putative helicase mug81. (66 aa)
RR48_00661Uncharacterized protein. (131 aa)
RR48_00428N6-adenosine-methyltransferase 70 kDa subunit. (136 aa)
RR48_03357Pre-mRNA-processing factor 19. (504 aa)
RR48_04293CUGBP Elav-like family member 4. (315 aa)
RR48_03915Serine/arginine-rich splicing factor 1. (385 aa)
RR48_04056Transformer-2 protein-like beta. (257 aa)
RR48_01684KH domain-containing, RNA-binding, signal transduction-associated protein 2. (507 aa)
RR48_00922Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (151 aa)
RR48_02022ELAV-like protein 4. (353 aa)
RR48_00619Probable ATP-dependent RNA helicase DDX46. (208 aa)
RR48_03505Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (220 aa)
RR48_01574Histone chaperone asf1. (216 aa)
RR48_04893Uncharacterized protein. (53 aa)
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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