STRINGSTRING
RR48_04290 RR48_04290 RR48_05098 RR48_05098 RR48_01054 RR48_01054 RR48_05039 RR48_05039 RR48_00753 RR48_00753 RR48_14978 RR48_14978 RR48_10197 RR48_10197 RR48_10198 RR48_10198 RR48_09544 RR48_09544 RR48_07891 RR48_07891 RR48_08943 RR48_08943 RR48_12748 RR48_12748 RR48_13217 RR48_13217 RR48_07662 RR48_07662 RR48_15279 RR48_15279 RR48_11465 RR48_11465 RR48_11778 RR48_11778 RR48_12345 RR48_12345 RR48_13071 RR48_13071 RR48_12729 RR48_12729 RR48_07636 RR48_07636 RR48_07621 RR48_07621 RR48_11149 RR48_11149 RR48_11333 RR48_11333 RR48_11392 RR48_11392 RR48_11751 RR48_11751 RR48_14369 RR48_14369 RR48_00355 RR48_00355 RR48_00545 RR48_00545 RR48_00981 RR48_00981 RR48_02731 RR48_02731 RR48_05471 RR48_05471 RR48_00395 RR48_00395 RR48_05478 RR48_05478 RR48_02733 RR48_02733 RR48_02890 RR48_02890 RR48_04076 RR48_04076 RR48_01619 RR48_01619 RR48_00980 RR48_00980 RR48_00245 RR48_00245 RR48_01688 RR48_01688 RR48_05040 RR48_05040 RR48_02200 RR48_02200 RR48_01978 RR48_01978 RR48_01349 RR48_01349 RR48_02727 RR48_02727 RR48_04953 RR48_04953 RR48_00124 RR48_00124 RR48_01020 RR48_01020 RR48_00983 RR48_00983 RR48_00979 RR48_00979 RR48_01979 RR48_01979 RR48_02730 RR48_02730 RR48_02732 RR48_02732 RR48_04838 RR48_04838 RR48_05173 RR48_05173 RR48_04347 RR48_04347 RR48_04265 RR48_04265 RR48_08060 RR48_08060 RR48_06448 RR48_06448 RR48_09886 RR48_09886 RR48_09857 RR48_09857 RR48_07722 RR48_07722 RR48_07792 RR48_07792 RR48_10408 RR48_10408 RR48_10433 RR48_10433 RR48_10468 RR48_10468 RR48_10131 RR48_10131 RR48_10409 RR48_10409 RR48_10480 RR48_10480 RR48_07048 RR48_07048 RR48_06305 RR48_06305 RR48_10862 RR48_10862 RR48_09788 RR48_09788 RR48_08677 RR48_08677 RR48_11552 RR48_11552 RR48_13564 RR48_13564 RR48_06928 RR48_06928 RR48_09247 RR48_09247 RR48_09730 RR48_09730 RR48_09098 RR48_09098 RR48_09343 RR48_09343 RR48_13755 RR48_13755 RR48_13876 RR48_13876 RR48_08725 RR48_08725 RR48_08726 RR48_08726 RR48_11920 RR48_11920 RR48_10255 RR48_10255 RR48_11888 RR48_11888 RR48_11923 RR48_11923 RR48_11988 RR48_11988 RR48_13807 RR48_13807 RR48_10573 RR48_10573 RR48_10681 RR48_10681 RR48_10574 RR48_10574 RR48_12598 RR48_12598 RR48_07308 RR48_07308 RR48_11919 RR48_11919 RR48_11989 RR48_11989 RR48_07495 RR48_07495 RR48_06095 RR48_06095
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RR48_04290Remodeling and spacing factor 1. (1613 aa)
RR48_05098Chromatin assembly factor 1 subunit A. (804 aa)
RR48_01054Chromatin-remodeling complex ATPase chain Iswi. (509 aa)
RR48_05039Uncharacterized protein. (218 aa)
RR48_00753Histone acetyltransferase type B catalytic subunit. (107 aa)
RR48_14978General transcription factor IIE subunit 1. (475 aa)
RR48_10197Uncharacterized protein. (1228 aa)
RR48_10198Uncharacterized protein. (149 aa)
RR48_09544DNA repair protein RAD52-like. (362 aa)
RR48_07891Protein HGV2. (431 aa)
RR48_08943Disks large-associated protein 5. (587 aa)
RR48_12748Chromodomain-helicase-DNA-binding protein Mi-2-like. (1914 aa)
RR48_13217Helicase ARIP4. (3905 aa)
RR48_07662DNA replication factor Cdt1. (646 aa)
RR48_15279Transcription initiation factor TFIID subunit 7. (398 aa)
RR48_11465DNA methyltransferase 1-associated protein 1. (464 aa)
RR48_11778Death domain-associated protein 6. (1450 aa)
RR48_12345Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1696 aa)
RR48_13071Histone H3.3. (129 aa)
RR48_12729Transcription initiation factor TFIID subunit 2. (1530 aa)
RR48_07636Meiotic recombination protein DMC1/LIM15-like. (320 aa)
RR48_07621DNA excision repair protein haywire. (900 aa)
RR48_11149C2H2-type domain-containing protein. (497 aa)
RR48_11333Chromatin assembly factor 1 subunit B. (582 aa)
RR48_11392Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (783 aa)
RR48_11751BrkDBD domain-containing protein. (349 aa)
RR48_14369Inorganic pyrophosphatase. (330 aa)
RR48_00355Transcriptional regulator ATRX-like. (142 aa)
RR48_00545SWI/SNF complex subunit SMARCC2. (106 aa)
RR48_00981Histone H2A; Belongs to the histone H2A family. (124 aa)
RR48_02731Histone H3; Belongs to the histone H3 family. (136 aa)
RR48_05471General transcription factor IIH subunit 3. (295 aa)
RR48_00395PIH1 domain-containing protein 1. (200 aa)
RR48_05478snRNA-activating protein complex subunit 4. (777 aa)
RR48_02733Histone H2B.2; Belongs to the histone H2B family. (134 aa)
RR48_02890General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (300 aa)
RR48_04076Complement component 1 Q subcomponent-binding protein, mitochondrial. (286 aa)
RR48_01619Uncharacterized protein. (613 aa)
RR48_00980Histone H2B; Belongs to the histone H2B family. (124 aa)
RR48_00245Transcription initiation factor TFIID subunit 1. (78 aa)
RR48_01688Transcription initiation factor TFIID subunit 1. (1291 aa)
RR48_05040Centromere protein I. (475 aa)
RR48_02200Helicase domino. (1512 aa)
RR48_01978Uncharacterized protein. (677 aa)
RR48_01349DNA polymerase epsilon subunit 3. (119 aa)
RR48_02727Histone H1. (226 aa)
RR48_04953DnaJ-like subfamily C member 9. (265 aa)
RR48_00124TFIIH basal transcription factor complex helicase XPD subunit. (62 aa)
RR48_01020Histone H2A; Belongs to the histone H2A family. (70 aa)
RR48_00983Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
RR48_00979Histone H3; Belongs to the histone H3 family. (136 aa)
RR48_01979RRN7-type domain-containing protein. (126 aa)
RR48_02730Histone H2A; Belongs to the histone H2A family. (121 aa)
RR48_02732Histone H2B.2; Belongs to the histone H2B family. (128 aa)
RR48_04838Putative histone-binding protein Caf1. (432 aa)
RR48_05173Uncharacterized protein. (88 aa)
RR48_04347RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (504 aa)
RR48_04265TFIIH basal transcription factor complex helicase XPD subunit. (1032 aa)
RR48_08060Protein Dr1. (184 aa)
RR48_06448Transcription initiation factor TFIID subunit 7. (375 aa)
RR48_09886Meiotic recombination protein SPO11. (430 aa)
RR48_09857Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3646 aa)
RR48_07722General transcription factor IIH subunit 1. (608 aa)
RR48_07792Histone acetyltransferase type B catalytic subunit. (326 aa)
RR48_10408Uncharacterized protein. (87 aa)
RR48_10433Death domain-associated protein 6. (467 aa)
RR48_10468Uncharacterized protein. (237 aa)
RR48_10131Actin-related protein 6; Belongs to the actin family. (362 aa)
RR48_10409Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
RR48_10480Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (2243 aa)
RR48_07048Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family. (419 aa)
RR48_06305Vacuolar protein sorting-associated protein 72-like. (478 aa)
RR48_10862Transcription initiation factor TFIID subunit 6. (650 aa)
RR48_09788Transcription initiation factor IIB. (309 aa)
RR48_08677Inhibitor of growth protein 3. (329 aa)
RR48_11552Uncharacterized protein. (319 aa)
RR48_13564snRNA-activating protein complex subunit 3. (442 aa)
RR48_06928Transcription factor TFIIIB component B''-like. (817 aa)
RR48_09247General transcription factor IIH subunit 2. (351 aa)
RR48_09730Mortality factor 4-like protein 1. (346 aa)
RR48_09098Uncharacterized protein. (2524 aa)
RR48_09343Protein SPT2-like. (689 aa)
RR48_13755Chromatin-remodeling complex ATPase chain Iswi. (1027 aa)
RR48_13876Bromodomain adjacent to zinc finger domain protein 1A. (1275 aa)
RR48_08725Uncharacterized protein. (166 aa)
RR48_08726Transcriptional regulator ATRX-like. (2048 aa)
RR48_11920Transcription factor IIIB 90 kDa subunit. (406 aa)
RR48_10255Kinetochore-associated protein 1. (799 aa)
RR48_11888DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (334 aa)
RR48_11923Transcription factor IIIB 90 kDa subunit. (197 aa)
RR48_11988Proteasome activator complex subunit 4. (1982 aa)
RR48_13807Transcriptional regulator ATRX. (841 aa)
RR48_10573Zinc finger HIT domain-containing protein 1. (153 aa)
RR48_10681Transcription initiation factor TFIID subunit 11. (300 aa)
RR48_10574General transcription factor IIH subunit 5. (58 aa)
RR48_12598YEATS domain-containing protein 4. (232 aa)
RR48_07308Transcription initiation factor TFIID subunit 12. (133 aa)
RR48_11919Uncharacterized protein. (164 aa)
RR48_11989Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (108 aa)
RR48_07495Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (475 aa)
RR48_06095Cell division control protein 45-like. (601 aa)
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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