STRINGSTRING
LKI_02145 LKI_02145 LKI_02150 LKI_02150 LKI_02155 LKI_02155 serC serC metE metE LKI_02250 LKI_02250 LKI_02775 LKI_02775 LKI_02865 LKI_02865 LKI_02870 LKI_02870 LKI_03365 LKI_03365 LKI_03395 LKI_03395 LKI_03400 LKI_03400 LKI_03405 LKI_03405 LKI_03690 LKI_03690 asd asd LKI_04705 LKI_04705 LKI_04710 LKI_04710 LKI_04785 LKI_04785 LKI_05460 LKI_05460 cysS cysS metAA metAA LKI_07100 LKI_07100 LKI_07105 LKI_07105 LKI_07110 LKI_07110 luxS luxS LKI_07120 LKI_07120 LKI_07130 LKI_07130 metK metK lysA lysA dapH dapH LKI_08855 LKI_08855 dapA dapA LKI_08865 LKI_08865 LKI_08970 LKI_08970 LKI_09150 LKI_09150 LKI_09360 LKI_09360 LKI_09370 LKI_09370 LKI_09890 LKI_09890 thrB thrB LKI_09900 LKI_09900 LKI_09905 LKI_09905
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LKI_02145Hypothetical protein. (240 aa)
LKI_02150Hypothetical protein; COG1267 Phosphatidylglycerophosphatase A and related proteins. (161 aa)
LKI_02155Hypothetical protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (392 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (361 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (765 aa)
LKI_02250YbgG; COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent). (306 aa)
LKI_02775COG1956 GAF domain-containing protein. (159 aa)
LKI_02865Membrane alanine aminopeptidase; COG0308 Aminopeptidase N. (843 aa)
LKI_02870COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (313 aa)
LKI_03365COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (383 aa)
LKI_03395COG0031 Cysteine synthase. (304 aa)
LKI_03400COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (387 aa)
LKI_03405COG1045 Serine acetyltransferase. (166 aa)
LKI_03690Putative glutamate--cysteine ligase; COG2918 Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family. (480 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (365 aa)
LKI_04705Hypothetical protein; COG0620 Methionine synthase II (cobalamin-independent). (163 aa)
LKI_04710Hypothetical protein; COG0620 Methionine synthase II (cobalamin-independent). (203 aa)
LKI_04785Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. (398 aa)
LKI_05460Hypothetical protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (306 aa)
cysScysteine--tRNA ligase; COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (483 aa)
metAAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (301 aa)
LKI_07100O-succinylhomoserine (thiol)-lyase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (369 aa)
LKI_07105COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (379 aa)
LKI_07110Hypothetical protein; COG0620 Methionine synthase II (cobalamin-independent). (375 aa)
luxSS-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (158 aa)
LKI_07120COG2873 O-acetylhomoserine sulfhydrylase. (429 aa)
LKI_07130COG0620 Methionine synthase II (cobalamin-independent). (375 aa)
metKS-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (385 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (433 aa)
dapH2,3,4, 5-tetrahydropyridine-2-carboxylateN-succinyltransferase- related protein; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. (235 aa)
LKI_08855Amino acid amidohydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. (383 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (290 aa)
LKI_08865Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (241 aa)
LKI_08970MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (224 aa)
LKI_09150Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. (393 aa)
LKI_09360COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. (346 aa)
LKI_09370COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (313 aa)
LKI_09890COG0527 Aspartokinases; Belongs to the aspartokinase family. (452 aa)
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (294 aa)
LKI_09900COG0460 Homoserine dehydrogenase. (428 aa)
LKI_09905COG0498 Threonine synthase. (486 aa)
Your Current Organism:
Leuconostoc kimchii
NCBI taxonomy Id: 762051
Other names: L. kimchii IMSNU 11154, Leuconostoc kimchii IMSNU 11154, Leuconostoc kimchii str. IMSNU 11154, Leuconostoc kimchii strain IMSNU 11154
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