STRINGSTRING
ADP39469.1 ADP39469.1 ADP39470.1 ADP39470.1 whiB whiB pdtaS pdtaS ADP39544.1 ADP39544.1 ylbL ylbL ADP39546.1 ADP39546.1 hemL hemL hemB hemB hemD hemD hemC hemC hemH hemH ADP39570.1 ADP39570.1 hemG hemG hemE hemE hemA hemA ADP39707.1 ADP39707.1 ADP39708.1 ADP39708.1 ADP39810.1 ADP39810.1 ADP39811.1 ADP39811.1 ccsB ccsB ccsB-2 ccsB-2 ADP39888.1 ADP39888.1 resA resA ADP39890.1 ADP39890.1 ADP39891.1 ADP39891.1 ADP39910.1 ADP39910.1 ADP39963.1 ADP39963.1 ADP39964.1 ADP39964.1 ADP39965.1 ADP39965.1 ADP39966.1 ADP39966.1 ideR ideR ADP40008.1 ADP40008.1 trmH trmH bfrB bfrB ADP40463.1 ADP40463.1 hmuO hmuO ADP40749.1 ADP40749.1 ADP40825.1 ADP40825.1 ADP40826.1 ADP40826.1 ADP40827.1 ADP40827.1 gppA_1 gppA_1 ADP40829.1 ADP40829.1 whiB-2 whiB-2 ADP40857.1 ADP40857.1 ADP40859.1 ADP40859.1 ADP40990.1 ADP40990.1 ADP41107.1 ADP41107.1 ADP41185.1 ADP41185.1 ADP41186.1 ADP41186.1 ADP41187.1 ADP41187.1 ADP41192.1 ADP41192.1 ADP41203.1 ADP41203.1 gyrB_2 gyrB_2 gyrA_1 gyrA_1 ADP41217.1 ADP41217.1 ADP41218.1 ADP41218.1 ADP41219.1 ADP41219.1 ADP41220.1 ADP41220.1 ADP41221.1 ADP41221.1 ADP41224.1 ADP41224.1 ADP41225.1 ADP41225.1 ADP41226.1 ADP41226.1 ADP41227.1 ADP41227.1 pdtaR pdtaR whiA whiA cyoE cyoE ADP41345.1 ADP41345.1 ADP41361.1 ADP41361.1 ADP41362.1 ADP41362.1 ADP41363.1 ADP41363.1 ykoD_1 ykoD_1 ADP41367.1 ADP41367.1 ADP41378.1 ADP41378.1 dapE_1 dapE_1 ADP41380.1 ADP41380.1 coxB coxB ctaD ctaD ctaF ctaF petB petB aioB aioB qcrC qcrC ctaE ctaE ADP41471.1 ADP41471.1 cobA cobA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADP39469.1Hypothetical protein. (239 aa)
ADP39470.1RDD family protein; Pfam: PF06271; InterPro: IPR010432. (149 aa)
whiBTranscription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (82 aa)
pdtaSATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG3920; Pfam: PF08448,PF07568,PF02518; InterPro: IPR003594. (521 aa)
ADP39544.1Hypothetical protein; COG: COG1615; Pfam: PF03699; InterPro: IPR005372. (1060 aa)
ylbLPDZ domain family protein; COG: COG3480. (397 aa)
ADP39546.1Putative hydrolase; COG: COG5282. (480 aa)
hemLGlutamate-1-semialdehyde-2,1-aminomutase; COG: COG0001; Pfam: PF00202; InterPro: IPR004639. (449 aa)
hemBPorphobilinogen synthase; COG: COG0113; Pfam: PF00490; InterPro: IPR013785; Belongs to the ALAD family. (331 aa)
hemDuroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (299 aa)
hemCHydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (371 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (454 aa)
ADP39570.1Chlorite O(2)-lyase; COG: COG3253; Pfam: PF06778; InterPro: IPR010644. (263 aa)
hemGProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (487 aa)
hemEUroporphyrinogen decarboxylase; COG: COG0407; Pfam: PF01208; InterPro: IPR000257; Belongs to the uroporphyrinogen decarboxylase family. (395 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (415 aa)
ADP39707.1Hypothetical protein. (63 aa)
ADP39708.1Hypothetical protein; 2.1.1.-. (482 aa)
ADP39810.1Glycine cleavage T-protein C-terminal barrel domain protein; COG: COG0354; Pfam: PF01571,PF08669; Belongs to the GcvT family. (402 aa)
ADP39811.1Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands; Belongs to the UPF0678 family. (225 aa)
ccsBCytochrome c-type biogenesis protein CcsB; COG: COG0755; Pfam: PF01578; InterPro: IPR002541. (370 aa)
ccsB-2ResB-like protein; COG: COG1333; Pfam: PF05140; InterPro: IPR007816. (584 aa)
ADP39888.1Cytochrome C biogenesis protein transmembrane region; COG: COG0785; Pfam: PF02683; InterPro: IPR003834. (338 aa)
resATat pathway signal sequence domain protein; COG: COG0526; Pfam: PF08534; InterPro: IPR012335. (213 aa)
ADP39890.1Phosphoglycerate mutase family protein; COG: COG0406; Pfam: PF00300; InterPro: IPR013078. (229 aa)
ADP39891.1Glutaredoxin-like protein; Pfam: PF05768; InterPro: IPR012335. (84 aa)
ADP39910.1Methyltransferase, HemK family; Pfam: PF08241. (578 aa)
ADP39963.1Hypothetical protein. (181 aa)
ADP39964.1Hypothetical protein. (106 aa)
ADP39965.1L-asparaginase, thermolabile; COG: COG4448; Pfam: PF06089; InterPro: IPR010349. (353 aa)
ADP39966.1Hypothetical protein. (143 aa)
ideRIron-dependent repressor IdeR; COG: COG1321; Pfam: PF01325,PF02742,PF04023; InterPro: IPR001367. (234 aa)
ADP40008.1Hypothetical protein. (200 aa)
trmHRNA methyltransferase, TrmH family; COG: COG0566; Pfam: PF00588; InterPro: IPR001537. (246 aa)
bfrBFerritin-like protein; Iron-storage protein. (174 aa)
ADP40463.1Hypothetical protein. (451 aa)
hmuOHeme oxygenase; COG: COG5398; Pfam: PF01126; InterPro: IPR002051. (235 aa)
ADP40749.1cytoChrome c oxidase Caa3 assembly factor; COG: COG3336; Pfam: PF05425. (722 aa)
ADP40825.1Septum formation initiator; Pfam: PF04977; InterPro: IPR007060. (175 aa)
ADP40826.1Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511. (122 aa)
ADP40827.1Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511. (102 aa)
gppA_1Ppx/GppA phosphatase family protein; COG: COG0248; Pfam: PF02541; InterPro: IPR003695. (318 aa)
ADP40829.1Putative type VII secretion-associated serine protease mycosin; COG: COG1404; Pfam: PF00082; InterPro: IPR000209. (873 aa)
whiB-2Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (161 aa)
ADP40857.1Hypothetical protein. (55 aa)
ADP40859.1Dolichyl-phosphate-mannose-protein mannosyltransferase; COG: COG1928; Pfam: PF02366. (534 aa)
ADP40990.1Peptidase, M23 family; Pfam: PF01551; InterPro: IPR016047. (252 aa)
ADP41107.1Hypothetical protein; COG: COG0789; InterPro: IPR000551. (223 aa)
ADP41185.1Hypothetical protein; COG: COG1637; Pfam: PF01939; InterPro: IPR002793. (275 aa)
ADP41186.1Hypothetical protein. (108 aa)
ADP41187.1Hypothetical protein. (272 aa)
ADP41192.1Hypothetical protein. (99 aa)
ADP41203.1Hypothetical protein. (70 aa)
gyrB_2DNA gyrase, B subunit, C-terminal domain protein; COG: COG0187; Pfam: PF02518,PF00204,PF01751,PF00986; InterPro: IPR001241. (700 aa)
gyrA_1DNA gyrase/topoisomerase IV, A subunit; COG: COG0188; Pfam: PF00521,PF03989; InterPro: IPR002205. (842 aa)
ADP41217.1Hypothetical protein. (198 aa)
ADP41218.1Type I phosphodiesterase / nucleotide pyrophosphatase; Pfam: PF01663; InterPro: IPR001952. (414 aa)
ADP41219.1Hypothetical protein. (363 aa)
ADP41220.1Hypothetical protein. (47 aa)
ADP41221.1Hypothetical protein. (99 aa)
ADP41224.1Hypothetical protein. (287 aa)
ADP41225.1Hypothetical protein. (185 aa)
ADP41226.1Hypothetical protein. (246 aa)
ADP41227.1Hypothetical protein. (701 aa)
pdtaRResponse regulator receiver domain protein; COG: COG3707; Pfam: PF00072,PF03861; InterPro: IPR001789. (204 aa)
whiAHypothetical protein; Involved in cell division and chromosome segregation. (321 aa)
cyoEProtoheme IX farnesyltransferase; COG: COG0109; Pfam: PF01040; InterPro: IPR006369. (359 aa)
ADP41345.1Cytochrome oxidase assembly protein; COG: COG1612; Pfam: PF02628. (348 aa)
ADP41361.1Hypothetical protein; COG: COG3346; InterPro: IPR002994. (322 aa)
ADP41362.1Hypothetical protein. (74 aa)
ADP41363.1Hypothetical protein. (163 aa)
ykoD_1ABC transporter, ATP-binding protein; COG: COG1119; Pfam: PF00005; InterPro: IPR003439. (261 aa)
ADP41367.1RNA methyltransferase, TrmH family; COG: COG0566; Pfam: PF00588; InterPro: IPR001537. (290 aa)
ADP41378.1Hypothetical protein. (207 aa)
dapE_1Peptidase dimerization domain protein; COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR002933. (468 aa)
ADP41380.1Iron-sulfur cluster assembly accessory protein; COG: COG0316; Pfam: PF01521; InterPro: IPR000361; Belongs to the HesB/IscA family. (117 aa)
coxBCytochrome c oxidase, subunit II; COG: COG1622; Pfam: PF02790,PF00116; InterPro: IPR014222. (295 aa)
ctaDCytochrome c oxidase, subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (567 aa)
ctaFHypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. (133 aa)
petBCytochrome b/b6 family protein; COG: COG1290; Pfam: PF00033; InterPro: IPR016175. (554 aa)
aioBRieske [2Fe-2S] domain protein; COG: COG0723; Pfam: PF00355; InterPro: IPR005806. (368 aa)
qcrCCOG: COG2010; Pfam: PF00034. (231 aa)
ctaECytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298. (185 aa)
ADP41471.1Hypothetical protein; Pfam: PF03993; InterPro: IPR007139. (428 aa)
cobAuroporphyrinogen-III C-methyltransferase; COG: COG0007; Pfam: PF00590; InterPro: IPR006366. (297 aa)
Your Current Organism:
Rothia dentocariosa
NCBI taxonomy Id: 762948
Other names: R. dentocariosa ATCC 17931, Rothia dentocariosa ATCC 17931, Rothia dentocariosa str. ATCC 17931, Rothia dentocariosa strain ATCC 17931
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