(10 nodes) Histone deacetylation, and Sin3, C-terminal network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N3B5	WD_REPEATS_REGION domain-containing protein. (483 aa)
	A0A162N4X5	Uncharacterized protein. (402 aa)
	A0A162PS53	MRG domain-containing protein. (293 aa)
	A0A162QA03	Uncharacterized protein. (696 aa)
	A0A162UN72	PHD-type domain-containing protein. (534 aa)
	A0A162UT33	PAPA-1 domain-containing protein. (265 aa)
	A0A162XQW1	Uncharacterized protein. (394 aa)
	A0A167KS92	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (435 aa)
	A0A167Q7Z4	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (457 aa)
	A0A167QE27	HDAC_interact domain-containing protein. (1269 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N3B5	A0A162N4X5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.903
A0A162N3B5	A0A162PS53	WD_REPEATS_REGION domain-containing protein.	MRG domain-containing protein.	0.926
A0A162N3B5	A0A162QA03	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.971
A0A162N3B5	A0A162UN72	WD_REPEATS_REGION domain-containing protein.	PHD-type domain-containing protein.	0.915
A0A162N3B5	A0A162UT33	WD_REPEATS_REGION domain-containing protein.	PAPA-1 domain-containing protein.	0.926
A0A162N3B5	A0A162XQW1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.800
A0A162N3B5	A0A167KS92	WD_REPEATS_REGION domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.933
A0A162N3B5	A0A167Q7Z4	WD_REPEATS_REGION domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.933
A0A162N3B5	A0A167QE27	WD_REPEATS_REGION domain-containing protein.	HDAC_interact domain-containing protein.	0.777
A0A162N4X5	A0A162N3B5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.903
A0A162N4X5	A0A162PS53	Uncharacterized protein.	MRG domain-containing protein.	0.815
A0A162N4X5	A0A162QA03	Uncharacterized protein.	Uncharacterized protein.	0.681
A0A162N4X5	A0A162UN72	Uncharacterized protein.	PHD-type domain-containing protein.	0.598
A0A162N4X5	A0A162UT33	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.815
A0A162N4X5	A0A167KS92	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.906
A0A162N4X5	A0A167Q7Z4	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.906
A0A162N4X5	A0A167QE27	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.773
A0A162PS53	A0A162N3B5	MRG domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.926
A0A162PS53	A0A162N4X5	MRG domain-containing protein.	Uncharacterized protein.	0.815
A0A162PS53	A0A162QA03	MRG domain-containing protein.	Uncharacterized protein.	0.786