(6 nodes) RNA polymerase I complex network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162TC68	Uncharacterized protein. (62 aa)
	A0A162TY78	Uncharacterized protein. (209 aa)
	A0A162UBR9	Uncharacterized protein. (326 aa)
	A0A163B6A5	Uncharacterized protein. (120 aa)
	A0A167KMD8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	A0A167R707	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1158 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162TC68	A0A162TY78	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TC68	A0A162UBR9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TC68	A0A163B6A5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TC68	A0A167KMD8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A162TC68	A0A167R707	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A162TY78	A0A162TC68	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TY78	A0A162UBR9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TY78	A0A163B6A5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162TY78	A0A167KMD8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A162TY78	A0A167R707	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A162UBR9	A0A162TC68	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162UBR9	A0A162TY78	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162UBR9	A0A163B6A5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162UBR9	A0A167KMD8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A162UBR9	A0A167R707	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A163B6A5	A0A162TC68	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163B6A5	A0A162TY78	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163B6A5	A0A162UBR9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163B6A5	A0A167KMD8	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A163B6A5	A0A167R707	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999