(13 nodes) Mixed, incl. rRNA 5-end processing, and EMG1/NEP1 methyltransferase network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162PI08	Uncharacterized protein. (230 aa)
	A0A162PNB0	WD_REPEATS_REGION domain-containing protein. (441 aa)
	A0A162U2V6	PINc domain-containing protein. (195 aa)
	A0A162U6Q5	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (458 aa)
	A0A162U6S5	KH domain-containing protein. (288 aa)
	A0A162URR7	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (243 aa)
	A0A162WNK8	Sas10 domain-containing protein. (196 aa)
	A0A162X4W3	WD_REPEATS_REGION domain-containing protein. (515 aa)
	A0A162XXK2	Uncharacterized protein; Belongs to the DEAD box helicase family. (560 aa)
	A0A167KNA8	Uncharacterized protein; Belongs to the DEAD box helicase family. (452 aa)
	A0A167MA83	CBF domain-containing protein. (482 aa)
	A0A167QR36	Uncharacterized protein; Belongs to the DEAD box helicase family. (403 aa)
	A0A167QTH7	Uncharacterized protein. (1451 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162PI08	A0A162PNB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A162PI08	A0A162U2V6	Uncharacterized protein.	PINc domain-containing protein.	0.999
A0A162PI08	A0A162U6Q5	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.991
A0A162PI08	A0A162U6S5	Uncharacterized protein.	KH domain-containing protein.	0.999
A0A162PI08	A0A162URR7	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A162PI08	A0A162WNK8	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
A0A162PI08	A0A162X4W3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A162PI08	A0A162XXK2	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.987
A0A162PI08	A0A167KNA8	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.990
A0A162PI08	A0A167MA83	Uncharacterized protein.	CBF domain-containing protein.	0.999
A0A162PI08	A0A167QR36	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.994
A0A162PI08	A0A167QTH7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162PNB0	A0A162PI08	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
A0A162PNB0	A0A162U2V6	WD_REPEATS_REGION domain-containing protein.	PINc domain-containing protein.	0.999
A0A162PNB0	A0A162U6Q5	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.991
A0A162PNB0	A0A162U6S5	WD_REPEATS_REGION domain-containing protein.	KH domain-containing protein.	0.999
A0A162PNB0	A0A162URR7	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A162PNB0	A0A162WNK8	WD_REPEATS_REGION domain-containing protein.	Sas10 domain-containing protein.	0.999
A0A162PNB0	A0A162X4W3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A162PNB0	A0A162XXK2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.997