(10 nodes) Preribosome, large subunit precursor network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N5C8	Brix domain-containing protein. (301 aa)
	A0A162TMJ8	Uncharacterized protein. (157 aa)
	A0A162UEB0	Ribosomal_L28e domain-containing protein. (243 aa)
	A0A162UMT3	Brix domain-containing protein. (291 aa)
	A0A163EBT8	Uncharacterized protein. (267 aa)
	A0A167KX43	Uncharacterized protein. (227 aa)
	A0A167M3D0	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (505 aa)
	A0A167P7P3	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (577 aa)
	A0A167PH19	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	A0A167R8Z2	Uncharacterized protein. (510 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N5C8	A0A162TMJ8	Brix domain-containing protein.	Uncharacterized protein.	0.991
A0A162N5C8	A0A162UEB0	Brix domain-containing protein.	Ribosomal_L28e domain-containing protein.	0.998
A0A162N5C8	A0A162UMT3	Brix domain-containing protein.	Brix domain-containing protein.	0.995
A0A162N5C8	A0A163EBT8	Brix domain-containing protein.	Uncharacterized protein.	0.998
A0A162N5C8	A0A167KX43	Brix domain-containing protein.	Uncharacterized protein.	0.993
A0A162N5C8	A0A167M3D0	Brix domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.984
A0A162N5C8	A0A167P7P3	Brix domain-containing protein.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.955
A0A162N5C8	A0A167PH19	Brix domain-containing protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.992
A0A162N5C8	A0A167R8Z2	Brix domain-containing protein.	Uncharacterized protein.	0.992
A0A162TMJ8	A0A162N5C8	Uncharacterized protein.	Brix domain-containing protein.	0.991
A0A162TMJ8	A0A162UEB0	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.990
A0A162TMJ8	A0A162UMT3	Uncharacterized protein.	Brix domain-containing protein.	0.998
A0A162TMJ8	A0A163EBT8	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A162TMJ8	A0A167KX43	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A162TMJ8	A0A167M3D0	Uncharacterized protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.992
A0A162TMJ8	A0A167P7P3	Uncharacterized protein.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.984
A0A162TMJ8	A0A167PH19	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.984
A0A162TMJ8	A0A167R8Z2	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A162UEB0	A0A162N5C8	Ribosomal_L28e domain-containing protein.	Brix domain-containing protein.	0.998
A0A162UEB0	A0A162TMJ8	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.990