(17 nodes) SMN complex, and Universal stress protein A family network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N9B2	Uncharacterized protein. (214 aa)
	A0A162PUH9	WD_REPEATS_REGION domain-containing protein. (1120 aa)
	A0A162PWY6	WD_REPEATS_REGION domain-containing protein. (321 aa)
	A0A162U1L4	Uncharacterized protein. (212 aa)
	A0A162WLQ9	Usp domain-containing protein. (180 aa)
	A0A162X2W0	Uncharacterized protein. (136 aa)
	A0A163AU93	Uncharacterized protein. (224 aa)
	A0A163DF35	Uncharacterized protein. (152 aa)
	A0A163DMX1	Usp domain-containing protein. (177 aa)
	A0A167JNZ1	Usp domain-containing protein. (156 aa)
	A0A167L161	SMN domain-containing protein. (154 aa)
	A0A167LDK2	Uncharacterized protein. (994 aa)
	A0A167MH92	Uncharacterized protein; Belongs to the DEAD box helicase family. (364 aa)
	A0A167MNL1	Usp domain-containing protein. (212 aa)
	A0A167NZL7	Uncharacterized protein. (287 aa)
	A0A167PYA1	Usp domain-containing protein. (355 aa)
	A0A167Q7H1	WD_REPEATS_REGION domain-containing protein. (2312 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N9B2	A0A167Q7H1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.929
A0A162PUH9	A0A162PWY6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.683
A0A162PUH9	A0A162U1L4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.743
A0A162PUH9	A0A163AU93	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.895
A0A162PUH9	A0A163DF35	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.786
A0A162PUH9	A0A167L161	WD_REPEATS_REGION domain-containing protein.	SMN domain-containing protein.	0.927
A0A162PUH9	A0A167LDK2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.404
A0A162PUH9	A0A167MH92	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.981
A0A162PWY6	A0A162PUH9	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.683
A0A162PWY6	A0A163AU93	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.816
A0A162PWY6	A0A167L161	WD_REPEATS_REGION domain-containing protein.	SMN domain-containing protein.	0.821
A0A162PWY6	A0A167MH92	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.968
A0A162U1L4	A0A162PUH9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.743
A0A162U1L4	A0A163AU93	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A162U1L4	A0A163DF35	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A162U1L4	A0A167L161	Uncharacterized protein.	SMN domain-containing protein.	0.683
A0A162U1L4	A0A167MH92	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.786
A0A162WLQ9	A0A163DF35	Usp domain-containing protein.	Uncharacterized protein.	0.601
A0A162WLQ9	A0A167L161	Usp domain-containing protein.	SMN domain-containing protein.	0.746
A0A162WLQ9	A0A167LDK2	Usp domain-containing protein.	Uncharacterized protein.	0.404