(6 nodes) Mixed, incl. Matrin/U1-C, C2H2-type zinc finger, and SWAP/Surp network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162N8H3	Matrin-type domain-containing protein. (469 aa)
	A0A162Q382	Uncharacterized protein. (598 aa)
	A0A162ZLU6	Uncharacterized protein. (110 aa)
	A0A162ZYA7	LRRcap domain-containing protein. (249 aa)
	A0A167KTV1	Uncharacterized protein. (801 aa)
	A0A167QQJ9	Matrin-type domain-containing protein. (236 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N8H3	A0A162Q382	Matrin-type domain-containing protein.	Uncharacterized protein.	0.999
A0A162N8H3	A0A162ZLU6	Matrin-type domain-containing protein.	Uncharacterized protein.	0.988
A0A162N8H3	A0A162ZYA7	Matrin-type domain-containing protein.	LRRcap domain-containing protein.	0.999
A0A162N8H3	A0A167KTV1	Matrin-type domain-containing protein.	Uncharacterized protein.	0.997
A0A162N8H3	A0A167QQJ9	Matrin-type domain-containing protein.	Matrin-type domain-containing protein.	0.998
A0A162Q382	A0A162N8H3	Uncharacterized protein.	Matrin-type domain-containing protein.	0.999
A0A162Q382	A0A162ZLU6	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A162Q382	A0A162ZYA7	Uncharacterized protein.	LRRcap domain-containing protein.	0.997
A0A162Q382	A0A167KTV1	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A162Q382	A0A167QQJ9	Uncharacterized protein.	Matrin-type domain-containing protein.	0.998
A0A162ZLU6	A0A162N8H3	Uncharacterized protein.	Matrin-type domain-containing protein.	0.988
A0A162ZLU6	A0A162Q382	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A162ZLU6	A0A162ZYA7	Uncharacterized protein.	LRRcap domain-containing protein.	0.999
A0A162ZLU6	A0A167KTV1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162ZLU6	A0A167QQJ9	Uncharacterized protein.	Matrin-type domain-containing protein.	0.997
A0A162ZYA7	A0A162N8H3	LRRcap domain-containing protein.	Matrin-type domain-containing protein.	0.999
A0A162ZYA7	A0A162Q382	LRRcap domain-containing protein.	Uncharacterized protein.	0.997
A0A162ZYA7	A0A162ZLU6	LRRcap domain-containing protein.	Uncharacterized protein.	0.999
A0A162ZYA7	A0A167KTV1	LRRcap domain-containing protein.	Uncharacterized protein.	0.999
A0A162ZYA7	A0A167QQJ9	LRRcap domain-containing protein.	Matrin-type domain-containing protein.	0.997