(5 nodes) Catalytic step 1 spliceosome, and Post-spliceosomal complex network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162PJI7	Uncharacterized protein. (147 aa)
	A0A162PTI1	SKIP_SNW domain-containing protein. (547 aa)
	A0A163ESU9	CCCH-type zinc finger transcription factor. (355 aa)
	A0A167MID4	Uncharacterized protein. (268 aa)
	A0A167QWU6	Uncharacterized protein. (693 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162PJI7	A0A162PTI1	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.999
A0A162PJI7	A0A163ESU9	Uncharacterized protein.	CCCH-type zinc finger transcription factor.	0.999
A0A162PJI7	A0A167MID4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162PJI7	A0A167QWU6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162PTI1	A0A162PJI7	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.999
A0A162PTI1	A0A163ESU9	SKIP_SNW domain-containing protein.	CCCH-type zinc finger transcription factor.	0.999
A0A162PTI1	A0A167MID4	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.999
A0A162PTI1	A0A167QWU6	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.999
A0A163ESU9	A0A162PJI7	CCCH-type zinc finger transcription factor.	Uncharacterized protein.	0.999
A0A163ESU9	A0A162PTI1	CCCH-type zinc finger transcription factor.	SKIP_SNW domain-containing protein.	0.999
A0A163ESU9	A0A167MID4	CCCH-type zinc finger transcription factor.	Uncharacterized protein.	0.999
A0A163ESU9	A0A167QWU6	CCCH-type zinc finger transcription factor.	Uncharacterized protein.	0.999
A0A167MID4	A0A162PJI7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A167MID4	A0A162PTI1	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.999
A0A167MID4	A0A163ESU9	Uncharacterized protein.	CCCH-type zinc finger transcription factor.	0.999
A0A167MID4	A0A167QWU6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A167QWU6	A0A162PJI7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A167QWU6	A0A162PTI1	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.999
A0A167QWU6	A0A163ESU9	Uncharacterized protein.	CCCH-type zinc finger transcription factor.	0.999
A0A167QWU6	A0A167MID4	Uncharacterized protein.	Uncharacterized protein.	0.999