(6 nodes) Mixed, incl. Spliceosomal conformational changes to generate catalytic conformation, and CBF1-interacting co-repressor CIR, N-terminal domain network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A162NCR2	Helicase C-terminal domain-containing protein. (193 aa)
	A0A162ZIE5	Uncharacterized protein. (266 aa)
	A0A163CVV5	SFM domain-containing protein. (260 aa)
	A0A167M212	Cir_N domain-containing protein. (216 aa)
	A0A167MBJ5	Slu7 domain-containing protein. (442 aa)
	A0A167QP77	Cwf21 domain-containing protein. (141 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162NCR2	A0A162ZIE5	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.984
A0A162NCR2	A0A163CVV5	Helicase C-terminal domain-containing protein.	SFM domain-containing protein.	0.979
A0A162NCR2	A0A167M212	Helicase C-terminal domain-containing protein.	Cir_N domain-containing protein.	0.941
A0A162NCR2	A0A167MBJ5	Helicase C-terminal domain-containing protein.	Slu7 domain-containing protein.	0.985
A0A162NCR2	A0A167QP77	Helicase C-terminal domain-containing protein.	Cwf21 domain-containing protein.	0.977
A0A162ZIE5	A0A162NCR2	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.984
A0A162ZIE5	A0A163CVV5	Uncharacterized protein.	SFM domain-containing protein.	0.937
A0A162ZIE5	A0A167M212	Uncharacterized protein.	Cir_N domain-containing protein.	0.990
A0A162ZIE5	A0A167MBJ5	Uncharacterized protein.	Slu7 domain-containing protein.	0.944
A0A162ZIE5	A0A167QP77	Uncharacterized protein.	Cwf21 domain-containing protein.	0.983
A0A163CVV5	A0A162NCR2	SFM domain-containing protein.	Helicase C-terminal domain-containing protein.	0.979
A0A163CVV5	A0A162ZIE5	SFM domain-containing protein.	Uncharacterized protein.	0.937
A0A163CVV5	A0A167M212	SFM domain-containing protein.	Cir_N domain-containing protein.	0.937
A0A163CVV5	A0A167MBJ5	SFM domain-containing protein.	Slu7 domain-containing protein.	0.997
A0A163CVV5	A0A167QP77	SFM domain-containing protein.	Cwf21 domain-containing protein.	0.815
A0A167M212	A0A162NCR2	Cir_N domain-containing protein.	Helicase C-terminal domain-containing protein.	0.941
A0A167M212	A0A162ZIE5	Cir_N domain-containing protein.	Uncharacterized protein.	0.990
A0A167M212	A0A163CVV5	Cir_N domain-containing protein.	SFM domain-containing protein.	0.937
A0A167M212	A0A167MBJ5	Cir_N domain-containing protein.	Slu7 domain-containing protein.	0.950
A0A167M212	A0A167QP77	Cir_N domain-containing protein.	Cwf21 domain-containing protein.	0.985