(5 nodes) RNA-directed RNA polymerase complex network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RdRP-1b	RNA-dependent RNA polymerase. (1112 aa)
	RdRP-3	RNA-dependent RNA polymerase. (1200 aa)
	A0A167J552	Uncharacterized protein. (77 aa)
	A0A167J9D7	Uncharacterized protein. (447 aa)
	A0A167RGN6	Uncharacterized protein. (1290 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A167J552	A0A167J9D7	A0A167J552	A0A167J9D7	Uncharacterized protein.	Uncharacterized protein.	0.602
A0A167J552	RdRP-1b	A0A167J552	A0A163ABK2	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.461
A0A167J552	RdRP-3	A0A167J552	A0A163CZ85	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.543
A0A167J9D7	A0A167J552	A0A167J9D7	A0A167J552	Uncharacterized protein.	Uncharacterized protein.	0.602
A0A167J9D7	A0A167RGN6	A0A167J9D7	A0A167RGN6	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A167J9D7	RdRP-1b	A0A167J9D7	A0A163ABK2	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.479
A0A167J9D7	RdRP-3	A0A167J9D7	A0A163CZ85	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.584
A0A167RGN6	A0A167J9D7	A0A167RGN6	A0A167J9D7	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A167RGN6	RdRP-1b	A0A167RGN6	A0A163ABK2	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.461
A0A167RGN6	RdRP-3	A0A167RGN6	A0A163CZ85	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.584
RdRP-1b	A0A167J552	A0A163ABK2	A0A167J552	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.461
RdRP-1b	A0A167J9D7	A0A163ABK2	A0A167J9D7	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.479
RdRP-1b	A0A167RGN6	A0A163ABK2	A0A167RGN6	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.461
RdRP-3	A0A167J552	A0A163CZ85	A0A167J552	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.543
RdRP-3	A0A167J9D7	A0A163CZ85	A0A167J9D7	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.584
RdRP-3	A0A167RGN6	A0A163CZ85	A0A167RGN6	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.584