(10 nodes) Translesion synthesis network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167PCI8	HORMA domain-containing protein. (166 aa)
	A0A167R7K1	DNA_pol_E_B domain-containing protein. (438 aa)
	A0A162U3K3	UmuC domain-containing protein. (406 aa)
	A0A162V0U9	SprT-like domain-containing protein. (266 aa)
	A0A162XGQ2	Vezatin domain-containing protein. (595 aa)
	A0A167KUM1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	A0A167L4L7	UmuC domain-containing protein. (258 aa)
	A0A167MNC4	UmuC domain-containing protein. (609 aa)
	A0A167PC19	Vezatin domain-containing protein. (595 aa)
	A0A162UGC7	DNA polymerase. (828 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162U3K3	A0A162UGC7	UmuC domain-containing protein.	DNA polymerase.	0.937
A0A162U3K3	A0A162V0U9	UmuC domain-containing protein.	SprT-like domain-containing protein.	0.728
A0A162U3K3	A0A162XGQ2	UmuC domain-containing protein.	Vezatin domain-containing protein.	0.962
A0A162U3K3	A0A167KUM1	UmuC domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.966
A0A162U3K3	A0A167L4L7	UmuC domain-containing protein.	UmuC domain-containing protein.	0.989
A0A162U3K3	A0A167MNC4	UmuC domain-containing protein.	UmuC domain-containing protein.	0.921
A0A162U3K3	A0A167PC19	UmuC domain-containing protein.	Vezatin domain-containing protein.	0.966
A0A162U3K3	A0A167PCI8	UmuC domain-containing protein.	HORMA domain-containing protein.	0.972
A0A162U3K3	A0A167R7K1	UmuC domain-containing protein.	DNA_pol_E_B domain-containing protein.	0.707
A0A162UGC7	A0A162U3K3	DNA polymerase.	UmuC domain-containing protein.	0.937
A0A162UGC7	A0A162V0U9	DNA polymerase.	SprT-like domain-containing protein.	0.498
A0A162UGC7	A0A162XGQ2	DNA polymerase.	Vezatin domain-containing protein.	0.930
A0A162UGC7	A0A167KUM1	DNA polymerase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.934
A0A162UGC7	A0A167L4L7	DNA polymerase.	UmuC domain-containing protein.	0.988
A0A162UGC7	A0A167MNC4	DNA polymerase.	UmuC domain-containing protein.	0.985
A0A162UGC7	A0A167PC19	DNA polymerase.	Vezatin domain-containing protein.	0.934
A0A162UGC7	A0A167PCI8	DNA polymerase.	HORMA domain-containing protein.	0.999
A0A162UGC7	A0A167R7K1	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.978
A0A162V0U9	A0A162U3K3	SprT-like domain-containing protein.	UmuC domain-containing protein.	0.728
A0A162V0U9	A0A162UGC7	SprT-like domain-containing protein.	DNA polymerase.	0.498