(18 nodes) sno(s)RNA processing network (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A167KYG7	Uncharacterized protein. (159 aa)
	A0A167J7P6	Uncharacterized protein. (115 aa)
	A0A163DLU9	Uncharacterized protein. (784 aa)
	A0A162XGA6	Uncharacterized protein. (1087 aa)
	A0A162TJ63	RNase_PH domain-containing protein. (230 aa)
	A0A162T3C0	Uncharacterized protein. (358 aa)
	A0A162NKQ8	CCCH-type zinc finger transcription factor. (186 aa)
	A0A162NH30	Uncharacterized protein. (234 aa)
	A0A162N370	Uncharacterized protein. (258 aa)
	A0A167QJ69	Uncharacterized protein. (813 aa)
	A0A167NFL0	Plus3 domain-containing protein. (536 aa)
	A0A167M8S7	Uncharacterized protein. (268 aa)
	A0A167M7D5	PUA domain-containing protein. (467 aa)
	A0A167M3M7	Uncharacterized protein. (185 aa)
	A0A167L9P2	HAD_SAK_1 domain-containing protein. (439 aa)
	A0A167L3A2	HRDC domain-containing protein. (528 aa)
	A0A167K3G3	HAD_SAK_1 domain-containing protein. (462 aa)
	A0A162XPK2	RNase_PH domain-containing protein. (262 aa)

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162N370	A0A162NH30	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162N370	A0A162TJ63	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A162N370	A0A162XGA6	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A162N370	A0A162XPK2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.997
A0A162N370	A0A167J7P6	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A162N370	A0A167L3A2	Uncharacterized protein.	HRDC domain-containing protein.	0.491
A0A162N370	A0A167M3M7	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A162N370	A0A167M8S7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162NH30	A0A162N370	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162NH30	A0A162TJ63	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A162NH30	A0A162XPK2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
A0A162NH30	A0A167J7P6	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A162NH30	A0A167L3A2	Uncharacterized protein.	HRDC domain-containing protein.	0.460
A0A162NH30	A0A167M3M7	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A162NH30	A0A167M8S7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A162NKQ8	A0A162T3C0	CCCH-type zinc finger transcription factor.	Uncharacterized protein.	0.406
A0A162T3C0	A0A162NKQ8	Uncharacterized protein.	CCCH-type zinc finger transcription factor.	0.406
A0A162T3C0	A0A162XGA6	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A162T3C0	A0A163DLU9	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A162T3C0	A0A167J7P6	Uncharacterized protein.	Uncharacterized protein.	0.434